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Thrombin: History & Applications

Thrombin (factor IIa, EC 3.4.21.5) is a serine protease that converts fibrinogen into strands of insoluble fibrin, as well as catalyzing many other coagulation-related reactions.

Language: English [EN]
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Thrombin topic overview

The analysis highlights History and Applications as prominent areas in the source structure around Thrombin.

Related topics
82
Source areas
7
Connected nodes
89
Extracted relationships
238
Concept neighborhoods
23
Bridge connections
89

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Physiology · 24 topics
Role in disease · 19 topics
Applications · 15 topics
Structure · 8 topics
Gene · 7 topics
Overview · 7 topics
History · 2 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

3.4.21.5
Aliases
F2, PT, RPRGL2, THPH1, coagulation factor II, thrombin
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1A2C, 1A3B, 1A3E, 1ABI, 1ABJ, 1AD8, 1AE8, 1AI8, 1AIX, 1AWF, 1AWH, 1AY6, 1B5G, 1B7X, 1BA8, 1BB0, 1BCU, 1BHX,…
Band
11p11.2 · 2 E1|2 50.63 cM
Bgee
right lobe of liver · testicle · oocyte · secondary oocyte · cerebellar hemisphere
BioGPS
More reference expression data

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

History

Physiology

Structure

Gene

Role in disease

Applications

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How Thrombin connects Entity context

The extracted context around Thrombin shows recurring relationship patterns in the source. For example, Thrombin → acute-phase response, antimicrobial humoral immune response mediated by antimicrobial peptide, blood coagulation, blood coagulation, fibrin clot formation, blood coagulation, intrinsic pathway, blood microparticle, calcium ion binding, cell surface receptor signaling pathway, collagen-containing extracellular matrix, endoplasmic reticulum lumen, endoplasmic reticulum to Golgi vesicle-mediated transport, enzyme activator activity, external side of plasma membrane, extracellular exosome, extracellular region, extracellular space, fibrinolysis, G protein-coupled receptor signaling pathway, Golgi lumen, growth factor activity Another extracted example is Thrombin → Adam MP, Anti-coagulation, Archived, Ardinger HH, February, GeneReviews, Human Thrombin, Month Archived, Mouse Thrombin, NBK1148, Pagon RA, PDB, PDBe-KB, PMID, Prothrombin Thrombophilia, RCSB PDB Molecule, S01, Seattle, Seattle WA, The MEROPS. Use these groups to spot repeated connection types before inspecting the individual relationships.

Thrombin

Top relations

Gene ontology · 61
Thrombin → acute-phase response, antimicrobial humoral immune response mediated by antimicrobial peptide, blood coagulation, blood coagulation, fibrin clot formation, blood coagulation, intrinsic pathway, blood microparticle, calcium ion binding, cell surface receptor signaling pathway, collagen-containing extracellular matrix, endoplasmic reticulum lumen, endoplasmic reticulum to Golgi vesicle-mediated transport, enzyme activator activity, external side of plasma membrane, extracellular exosome, extracellular region, extracellular space, fibrinolysis, G protein-coupled receptor signaling pathway, Golgi lumen, growth factor activity
related to External links · 27
Thrombin → Adam MP, Anti-coagulation, Archived, Ardinger HH, February, GeneReviews, Human Thrombin, Month Archived, Mouse Thrombin, NBK1148, Pagon RA, PDB, PDBe-KB, PMID, Prothrombin Thrombophilia, RCSB PDB Molecule, S01, Seattle, Seattle WA, The MEROPS
Bgee · 19
Thrombin → cerebellar hemisphere, embryo, fetal liver hematopoietic progenitor cell, fundus, gallbladder, human fetus, left lobe of liver, morula, oocyte, popliteal artery, primary oocyte, right hemisphere of cerebellum, right lobe of liver, secondary oocyte, sexually immature organism, testicle, tibial arteries, yolk sac, zygote
RNA expression pattern · 19
Thrombin → cerebellar hemisphere, embryo, fetal liver hematopoietic progenitor cell, fundus, gallbladder, human fetus, left lobe of liver, morula, oocyte, popliteal artery, primary oocyte, right hemisphere of cerebellum, right lobe of liver, secondary oocyte, sexually immature organism, testicle, tibial arteries, yolk sac, zygote
related to Mechanism of action · 12
Thrombin → Aα, Bβ, Factor XIIIa, In, The, Va, VIII, VIIIa, XI, XIa, XIII, XIIIa
related to Gene · 10
Thrombin → Crohn's, Factor II, G20210A, Homozygous, II, Leiden, Other, Prothrombin G20210A, The, There
related to Structure · 10
Thrombin → C-terminal, Da, Factor Xa, Gla, Kringle, N-terminal Gla, PA, Prothrombin, Structurally, The
related to Synthesis · 10
Thrombin → Deficiency, Factor, Gla, In, K-dependent, Newborn, Prothrombin, The, Va, Xa
related to Medicine and surgery · 8
Thrombin → Heparin, Indications, K-dependent, Manipulation, Prothrombin, The, Warfarin, Xa
related to Food production · 7
Thrombin → According, Both, Fibrimex, General, Jan Bertoft, Swedish Consumers' Association, The

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

prothrombin factor coagulation human fibrin protein gene bp fibrinogen binding blood chr band serine activity enzyme also activation protease form

Thrombin relationships Subject–Predicate–Object triples

TTTA extracted 238 structured relationships around Thrombin. Examples in this analysis include Thrombin → 3.4.21.5 → ↗ and Thrombin → Aliases → F2, PT, RPRGL2, THPH1, coagulation factor II, thrombin. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
Thrombin3.4.21.51.00infobox
ThrombinAliasesF2, PT, RPRGL2, THPH1, coagulation factor II, thrombin1.00infobox
ThrombinAvailable structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1A2C, 1A3B, 1A3E, 1ABI, 1ABJ, 1AD8, 1AE8, 1AI8, 1AIX, 1AWF, 1AWH, 1AY6, 1B5G, 1B7X, 1BA8, 1BB0, 1BCU, 1BHX,…1.00infobox
ThrombinBand11p11.21.00infobox
ThrombinBand2 E1|2 50.63 cM1.00infobox
ThrombinBgeeright lobe of liver1.00infobox
ThrombinBgeetesticle1.00infobox
ThrombinBgeeoocyte1.00infobox
ThrombinBgeesecondary oocyte1.00infobox
ThrombinBgeecerebellar hemisphere1.00infobox
ThrombinBgeeright hemisphere of cerebellum1.00infobox
ThrombinBgeepopliteal artery1.00infobox
ThrombinBgeetibial arteries1.00infobox
ThrombinBgeefundus1.00infobox
ThrombinBgeeembryo1.00infobox
ThrombinBgeeleft lobe of liver1.00infobox
ThrombinBgeefetal liver hematopoietic progenitor cell1.00infobox
ThrombinBgeegallbladder1.00infobox
ThrombinBgeeyolk sac1.00infobox
ThrombinBgeehuman fetus1.00infobox
ThrombinBgeesexually immature organism1.00infobox
ThrombinBgeemorula1.00infobox
ThrombinBgeeprimary oocyte1.00infobox
ThrombinBgeezygote1.00infobox
ThrombinBioGPSMore reference expression data1.00infobox
ThrombinChr.Chromosome 11 (human)1.00infobox
ThrombinChr.Chromosome 2 (mouse)1.00infobox
ThrombinDatabasesNCBI: entry; OMA: entry1.00infobox
ThrombinEnd46,739,506 bp1.00infobox
ThrombinEnd91,466,759 bp1.00infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around Thrombin bring nearby vocabulary together. In this analysis, examples include Active, Thrombomodulin and Proteolysis. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • fibrinogen
    • Fibrin
    • Proteolysis
    • Binding
    • Blood
    • Coagulation
    • External
    • Thrombin
    • F2
    • Mouse
    • Process
    • Band
    • Chromosome
  • fibrin
    • Fibrinogen
    • Formation
    • Proteolysis
    • Blood
    • Coagulation
    • External
    • F2
    • Mouse
    • Process
    • Thrombin
    • Band
    • Chromosome
  • factor x
    • Coagulation
    • Fibrin
    • Prothrombin
    • F2
    • Ii
    • Formation
    • G20210a
    • Gene
    • Thrombin
    • Activity
    • Also
    • Fibrinogen
  • factor v
    • Coagulation
    • Fibrin
    • Prothrombin
    • F2
    • Ii
    • Formation
    • G20210a
    • Gene
    • Thrombin
    • Activity
    • Also
    • Fibrinogen
  • factor xi
    • Coagulation
    • Fibrin
    • Prothrombin
    • F2
    • Ii
    • Formation
    • G20210a
    • Gene
    • Thrombin
    • Activity
    • Also
    • Fibrinogen
  • factor xiiia
    • Coagulation
    • Fibrin
    • Prothrombin
    • F2
    • Ii
    • Formation
    • G20210a
    • Gene
    • Thrombin
    • Activity
    • Also
    • Fibrinogen
  • factor xa
    • Coagulation
    • Fibrin
    • Prothrombin
    • F2
    • Ii
    • Formation
    • G20210a
    • Gene
    • Thrombin
    • Activity
    • Also
    • Fibrinogen
  • gene
    • Chromosome
    • Human
    • Bp
    • Chr
    • External
    • Ii
    • Mouse
    • Band
    • Enzyme
    • Production
    • Activity
    • Blood

Connections between topic areas Semantic bridges

For Thrombin, one of the stronger structural bridges in this analysis connects Thrombin with Physiology. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
ThrombinPhysiology · splits 65 ⟂ 25
ThrombinRole in disease · splits 70 ⟂ 20
ThrombinApplications · splits 74 ⟂ 16
ThrombinStructure · splits 81 ⟂ 9
ThrombinOverview · splits 82 ⟂ 8
ThrombinGene · splits 82 ⟂ 8
ThrombinHistory · splits 87 ⟂ 3

Map overview Semantic statistics

Thrombin

Nodes90
Edges89
Triples238
Avg. degree1.98
Density0.022222
Components1

Source & methodology

TTTA analyzes the structure around Thrombin to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as History & Applications, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — Thrombin · EN edition · Analysis: TopicsToTalkAbout

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