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Mucin short variant S1

Mucin short variant S1, also called polymorphic epithelial mucin (PEM) or epithelial membrane antigen (EMA), is a mucin encoded by the MUC1 gene in humans. Mucin short variant S1 is a glycoprotein with extensive O-linked glycosylation of its extracellular domain. Mucins line the apical surface of epithelial cells in the lungs, stomach, intestines, eyes…

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Aliases
MUC1, ADMCKD, ADMCKD1, CA 15-3, CD227, EMA, H23AG, KL-6, MAM6, MCD, MCKD, MCKD1, MUC-1, MUC-1/SEC, MUC-1/X, MUC1/ZD, PEM, PEMT, PUM, mucin 1, cell surface associated, ADTKD2, Ca…
Available structures
Available structuresPDBHuman UniProt search: PDBe RCSB List of PDB id codes1SM3, 2ACM
Band
1q22
Bgee
pylorus · pancreatic ductal cell · nasal epithelium · right uterine tube · cardia
BioGPS
More reference expression data
Chr.
Chromosome 1 (human)

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Overview

Structure

Function

Interactions

Role in cancer

Diagnostic uses

As a therapeutic drug target

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Map overview Semantic statistics

Mucin short variant S1

Nodes74
Edges73
Triples67
Avg. degree1.97
Density0.027027
Components1

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Mucin short variant S1

Top relations

Gene ontology · 27
Mucin short variant S1 → apical plasma membrane, cytokine-mediated signaling pathway, cytoplasm, DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest, DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator, extracellular exosome, extracellular region, extracellular space, Golgi lumen, integral component of membrane, integral component of plasma membrane, membrane, negative regulation of cell adhesion mediated by integrin, negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator, negative regulation of transcription by competitive promoter binding, nucleus, O-glycan processing, p53 binding, plasma membrane, positive regulation of histone H4 acetylation
Bgee · 10
Mucin short variant S1 → buccal mucosa cell, cardia, gastric mucosa, lower lobe of lung, nasal epithelium, olfactory zone of nasal mucosa, palpebral conjunctiva, pancreatic ductal cell, pylorus, right uterine tube
RNA expression pattern · 10
Mucin short variant S1 → buccal mucosa cell, cardia, gastric mucosa, lower lobe of lung, nasal epithelium, olfactory zone of nasal mucosa, palpebral conjunctiva, pancreatic ductal cell, pylorus, right uterine tube
Aliases · 1
Mucin short variant S1 → MUC1, ADMCKD, ADMCKD1, CA 15-3, CD227, EMA, H23AG, KL-6, MAM6, MCD, MCKD, MCKD1, MUC-1, MUC-1/SEC, MUC-1/X, MUC1/ZD, PEM, PEMT, PUM, mucin 1, cell surface associated, ADTKD2, Ca…
Available structures · 1
Mucin short variant S1 → Available structuresPDBHuman UniProt search: PDBe RCSB List of PDB id codes1SM3, 2ACM
Band · 1
Mucin short variant S1 → 1q22
BioGPS · 1
Mucin short variant S1 → More reference expression data
Chr. · 1
Mucin short variant S1 → Chromosome 1 (human)
Databases · 1
Mucin short variant S1 → NCBI: entry; OMA: entry
End · 1
Mucin short variant S1 → 155,192,916 bp

Important terminology Word statistics

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Important terminology

muc1 cell cancer domain extracellular surface gene glycosylation protein associated cells breast beta-catenin ca mucin cytoplasmic tail shown human 15-3

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
Mucin short variant S1AliasesMUC1, ADMCKD, ADMCKD1, CA 15-3, CD227, EMA, H23AG, KL-6, MAM6, MCD, MCKD, MCKD1, MUC-1, MUC-1/SEC, MUC-1/X, MUC1/ZD, PEM, PEMT, PUM, mucin 1, cell surface associated, ADTKD2, Ca…1.00infobox
Mucin short variant S1Available structuresAvailable structuresPDBHuman UniProt search: PDBe RCSB List of PDB id codes1SM3, 2ACM1.00infobox
Mucin short variant S1Band1q221.00infobox
Mucin short variant S1Bgeepylorus1.00infobox
Mucin short variant S1Bgeepancreatic ductal cell1.00infobox
Mucin short variant S1Bgeenasal epithelium1.00infobox
Mucin short variant S1Bgeeright uterine tube1.00infobox
Mucin short variant S1Bgeecardia1.00infobox
Mucin short variant S1Bgeeolfactory zone of nasal mucosa1.00infobox
Mucin short variant S1Bgeelower lobe of lung1.00infobox
Mucin short variant S1Bgeebuccal mucosa cell1.00infobox
Mucin short variant S1Bgeegastric mucosa1.00infobox
Mucin short variant S1Bgeepalpebral conjunctiva1.00infobox
Mucin short variant S1BioGPSMore reference expression data1.00infobox
Mucin short variant S1Chr.Chromosome 1 (human)1.00infobox
Mucin short variant S1DatabasesNCBI: entry; OMA: entry1.00infobox
Mucin short variant S1End155,192,916 bp1.00infobox
Mucin short variant S1EnsemblENSG000001854991.00infobox
Mucin short variant S1Entrez45821.00infobox
Mucin short variant S1External IDsOMIM: 158340; GeneCards: MUC11.00infobox
Mucin short variant S1Gene location (Human)Gene location (Human)Chr.Chromosome 1 (human)Band1q22Start155,185,824 bpEnd155,192,916 bp1.00infobox
Mucin short variant S1Gene ontologyprotein binding1.00infobox
Mucin short variant S1Gene ontologytranscription coregulator activity1.00infobox
Mucin short variant S1Gene ontologyRNA polymerase II cis-regulatory region sequence-specific DNA binding1.00infobox
Mucin short variant S1Gene ontologyp53 binding1.00infobox
Mucin short variant S1Gene ontologyextracellular region1.00infobox
Mucin short variant S1Gene ontologycytoplasm1.00infobox
Mucin short variant S1Gene ontologyintegral component of membrane1.00infobox
Mucin short variant S1Gene ontologynucleus1.00infobox
Mucin short variant S1Gene ontologyGolgi lumen1.00infobox

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