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NPM1: Function, Clinical significance & Interactions

Nucleophosmin (NPM), also known as nucleolar phosphoprotein B23 or numatrin, is a protein that in humans is encoded by the NPM1 gene.

Language: English [EN]
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NPM1 topic overview

The analysis highlights Function, Clinical significance and Interactions as prominent areas in the source structure around NPM1.

Related topics
36
Source areas
7
Connected nodes
43
Extracted relationships
262
Concept neighborhoods
11
Bridge connections
43

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Function · 14 topics
Clinical significance · 6 topics
Interactions · 5 topics
Gene · 4 topics
Structure · 3 topics
Discovery · 2 topics
Overview · 2 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases
NPM1, B23, NPM, nucleophosmin (nucleolar phosphoprotein B23, numatrin), nucleophosmin, nucleophosmin 1
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2LLH, 2P1B, 2VXD
Band
5q35.1 · 11|11 A4
Bgee
Achilles tendon · left ovary · ventricular zone · right ovary · canal of the cervix
BioGPS
More reference expression data
Chr.
Chromosome 5 (human) · Chromosome 11 (mouse)

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Discovery

Gene

Structure

Function

Clinical significance

Interactions

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How NPM1 connects Entity context

The extracted context around NPM1 shows recurring relationship patterns in the source. For example, NPM1 → cell growth, cell volume homeostasis, cellular response to UV, CENP-A containing chromatin assembly, centrosome, centrosome cycle, chromatin binding, chromatin remodeling, cytoplasm, cytoskeleton, cytosol, DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest, DNA repair, focal adhesion, granular component, histone binding, intracellular protein transport, large ribosomal subunit, membrane, microtubule organizing center Another extracted example is NPM1 → All, ARF, Colombo, Degradation, Furthermore, Grisendi, Huang, Interestingly, Internal, It, Itahana, ITS2, Knockdown, Lerch-Gaggl, Lindström, Maggi, Moreover, Most, NPM3, Other. Use these groups to spot repeated connection types before inspecting the individual relationships.

NPM1

Top relations

Gene ontology · 88
NPM1 → cell growth, cell volume homeostasis, cellular response to UV, CENP-A containing chromatin assembly, centrosome, centrosome cycle, chromatin binding, chromatin remodeling, cytoplasm, cytoskeleton, cytosol, DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest, DNA repair, focal adhesion, granular component, histone binding, intracellular protein transport, large ribosomal subunit, membrane, microtubule organizing center
related to Ribosome biogenesis · 29
NPM1 → All, ARF, Colombo, Degradation, Furthermore, Grisendi, Huang, Interestingly, Internal, It, Itahana, ITS2, Knockdown, Lerch-Gaggl, Lindström, Maggi, Moreover, Most, NPM3, Other
Bgee · 19
NPM1 → Achilles tendon, blastocyst, body of pancreas, body of uterus, canal of the cervix, ectocervix, embryo, epiblast, ganglionic eminence, genital tubercle, left ovary, morula, primary oocyte, right ovary, right uterine tube, secondary oocyte, tail of embryo, ventricular zone, zygote
RNA expression pattern · 19
NPM1 → Achilles tendon, blastocyst, body of pancreas, body of uterus, canal of the cervix, ectocervix, embryo, epiblast, ganglionic eminence, genital tubercle, left ovary, morula, primary oocyte, right ovary, right uterine tube, secondary oocyte, tail of embryo, ventricular zone, zygote
related to Structure · 17
NPM1 → All, Drosophila NLP, Drosophila Nucleoplasmin, Further, It, NES, NLS, NoLS, NPM, Nucleoplasmin, The, The N-terminal, The NPM1, This, Two, Xenopus NO38, Xenopus Nucleoplasmin
related to Clinical significance · 14
NPM1 → ARF, C-terminal, Chromosomal, DNMT3A, Heterozygous, Hodgkin, In, It, NPM, NPM1c, Of, Strategies, The NPM1, This
related to Gene · 11
NPM1 → B23, Both, C-terminal, DNA, HeLa, However, In, Nucleophosmin, The, Three, Transcript
related to Molecular and histone chaperone · 10
NPM1 → ATP, Both, Further, Furthermore, HIV-1 Rev, N-terminal, NES, NLS, Similarly, Since
related to Function · 8
NPM1 → G-quadruplex-forming, However, It, Its, SENP3, SENP5, SUMOylation, The
related to Discovery · 6
NPM1 → At, B23, It, Novikoff, Xenopus NO38, Xenopus Nucleoplasmin

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

human ribosome nucleolus biogenesis proteins protein gene histone nucleolar chaperone core also structure binding activity nucleoplasmin domain bp bind tumor

NPM1 relationships Subject–Predicate–Object triples

TTTA extracted 262 structured relationships around NPM1. Examples in this analysis include NPM1 → Aliases → NPM1, B23, NPM, nucleophosmin (nucleolar phosphoprotein B23, numatrin), nucleophosmin, nucleophosmin 1 and NPM1 → Available structures → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2LLH, 2P1B, 2VXD. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
NPM1AliasesNPM1, B23, NPM, nucleophosmin (nucleolar phosphoprotein B23, numatrin), nucleophosmin, nucleophosmin 11.00infobox
NPM1Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2LLH, 2P1B, 2VXD1.00infobox
NPM1Band5q35.11.00infobox
NPM1Band11|11 A41.00infobox
NPM1BgeeAchilles tendon1.00infobox
NPM1Bgeeleft ovary1.00infobox
NPM1Bgeeventricular zone1.00infobox
NPM1Bgeeright ovary1.00infobox
NPM1Bgeecanal of the cervix1.00infobox
NPM1Bgeebody of uterus1.00infobox
NPM1Bgeeganglionic eminence1.00infobox
NPM1Bgeebody of pancreas1.00infobox
NPM1Bgeeright uterine tube1.00infobox
NPM1Bgeeectocervix1.00infobox
NPM1Bgeetail of embryo1.00infobox
NPM1Bgeeepiblast1.00infobox
NPM1Bgeegenital tubercle1.00infobox
NPM1Bgeemorula1.00infobox
NPM1Bgeeembryo1.00infobox
NPM1Bgeeprimary oocyte1.00infobox
NPM1Bgeezygote1.00infobox
NPM1Bgeesecondary oocyte1.00infobox
NPM1Bgeeblastocyst1.00infobox
NPM1BioGPSMore reference expression data1.00infobox
NPM1Chr.Chromosome 5 (human)1.00infobox
NPM1Chr.Chromosome 11 (mouse)1.00infobox
NPM1DatabasesNCBI: entry; OMA: entry1.00infobox
NPM1End171,411,810 bp1.00infobox
NPM1End33,113,206 bp1.00infobox
NPM1EnsemblENSG000001811631.00infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around NPM1 bring nearby vocabulary together. In this analysis, examples include Ribosome, Biogenesis and Human. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • NPM1
    • Ribosome
    • Biogenesis
    • Human
    • Proteins
    • Core
    • Chaperone
    • Al
    • Et
    • Nucleolar
    • Histone
    • Protein
    • Overexpression
  • npm1
    • Ribosome
    • Biogenesis
    • Human
    • Proteins
    • Core
    • Chaperone
    • Al
    • Et
    • Nucleolar
    • Histone
    • Protein
    • Overexpression
  • gene
    • Chromosome
    • Phosphoprotein
    • Bp
    • Chr
    • Nucleolar
    • Band
    • Nucleophosmin
    • Function
    • Human
    • Molecular
    • Npm
    • Transcription
  • function
    • Phosphoprotein
    • Bp
    • Chr
    • Chaperone
    • Histone
    • Chromosome
    • Molecular
    • Gene
    • Nucleolar
    • Nucleolus
    • Biogenesis
    • Human
  • chromosome 5
    • Bp
    • Band
    • Gene
    • Human
    • Phosphoprotein
    • Nucleophosmin
    • Function
    • Molecular
    • Transcription
    • Nucleolar
    • Ribosome
    • Binding
  • phosphoprotein
    • Bp
    • Chr
    • Chromosome
    • Function
    • Molecular
    • Protein
    • Histone
    • Band
    • Biogenesis
    • Human
    • Ribosome
    • Cells
  • protein
    • Ribosome
    • Domain
    • Nucleolus
    • Nucleoplasmin
    • Transcription
    • Core
    • Found
    • Localization
    • Xenopus
    • Al
    • Bind
    • Et
  • nucleolus
    • Proteins
    • Localization
    • Protein
    • Ribosome
    • Phosphoprotein
    • Nucleophosmin
    • Isoform
    • Transcription
    • Well
    • Bind
    • Tumor
    • Domain

Connections between topic areas Semantic bridges

For NPM1, one of the stronger structural bridges in this analysis connects NPM1 with Function. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
NPM1Function · splits 29 ⟂ 15
NPM1Clinical significance · splits 37 ⟂ 7
NPM1Interactions · splits 38 ⟂ 6
NPM1Gene · splits 39 ⟂ 5
NPM1Structure · splits 40 ⟂ 4
NPM1Overview · splits 41 ⟂ 3
NPM1Discovery · splits 41 ⟂ 3

Map overview Semantic statistics

NPM1

Nodes44
Edges43
Triples262
Avg. degree1.95
Density0.045455
Components1

Source & methodology

TTTA analyzes the structure around NPM1 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Function, Clinical significance & Interactions, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — NPM1 · EN edition · Analysis: TopicsToTalkAbout

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