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Micropeptide

Micropeptides (also referred to as microproteins) are polypeptides with a length of less than 100-150 amino acids that are encoded by short open reading frames (sORFs). In this respect, they differ from many other active small polypeptides, which are produced through the posttranslational cleavage of larger polypeptides. In terms of size, micropeptides…

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Eukaryotic examples

EukaryoticBrick1ShavenbabyELABELAGastrulation
45 related topics

Identification

ORFsRNA-SeqTranscriptomeRibosome profilingLactimidomycin
8 related topics

Overview

MicroproteinsPolypeptidesAmino acidsShort open reading framesCleavage
16 related topics

Validating protein-coding potential

AntibodiesGenome editingPlasmid
3 related topics

Topics to explore

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Overview

Identification

Validating protein-coding potential

Prokaryotic examples

Eukaryotic examples

Advanced semantic analysis

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Map overview Semantic statistics

Micropeptide

Nodes81
Edges80
Triples142
Avg. degree1.98
Density0.024691
Components1

How this topic connects Entity context

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Micropeptide

Top relations

related to Mus musculus (mouse) · 23
Micropeptide → ALN, ATPase, By, Ca2, ELN, Gm7325, In, It, LOC101929726, Mln, Mymk, Mymx, Myomaker, Myomixer, Myoregulin, Orthologs, Pln, SERCA, Similarly, Sln
related to Homo sapiens (human) · 18
Micropeptide → APELA, APLN, APLNR, Decapping, EDC4, ELA, ELABELA, Enhancer, GPCR, In, It, Its, LINC01420, NoBody, P-bodies, P-body, PI3/AKT, RNA
related to References · 16
Micropeptide → CC BY, December, Farkas, ISSN, Lock-gray-alt-2, Lock-green, Lock-red-alt-2, Maria, Michael, PLOS Genetics, PMC, PMID, Sousa, This, Wikidata Q60017699, Wikisource-logo
has application · 8
Micropeptide → Comparison, LC-MS/MS, Liquid, MS, One, Proteogenomics, RNA-Seq, This
related to Arabidopsis thaliana · 8
Micropeptide → It, PIN, PLS, ROT4, ROTUNDIFOLIA, The, The POLARIS, This
related to Zea mays (maize) · 8
Micropeptide → After, Brick1, Brk1, In, It, Zm401p10, Zm908, Zm908p11
related to Escherichia coli (E. coli) · 7
Micropeptide → L34, L36, Leader, Micropeptides, Most, Ribosomal, Toxic
related to RNA sequencing · 7
Micropeptide → Because, NGS, One, RNA, RNA-Seq, RNAs, This
related to Databases and repositories · 6
Micropeptide → ARA-PEPs, Arabidopsis, ORFs, RNAs, SmProt, There
related to Ribosome profiling (Ribo-Seq) · 6
Micropeptide → If, One, ORF, Ribosome, This, Translation

Important terminology Word statistics

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Important terminology

micropeptides small sorfs proteins aa peptide found encoded amino cell potential conserved gene expressed also length expression function translation human

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
harringtonineinstance ofOne method uses compounds0.80text
puromycin or lactimidomycin to stop ribosomes at translation initiation sitesinstance ofOne method uses compounds0.80text
cytochrome cinstance ofwhere it inserts and releases apoptogenic proteins0.80text
Micropeptidehas applicationProteogenomics0.60section
Micropeptidehas applicationThis0.60section
Micropeptidehas applicationOne0.60section
Micropeptidehas applicationRNA-Seq0.60section
Micropeptidehas applicationLiquid0.60section
Micropeptidehas applicationMS0.60section
Micropeptidehas applicationLC-MS/MS0.60section
Micropeptidehas applicationComparison0.60section
Micropeptiderelated to AntibodiesCustom0.60section

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