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HDAC9

Histone deacetylase 9 is an enzyme that in humans is encoded by the HDAC9 gene.

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3.5.1.98
Aliases
HDAC9, HD7, HD7b, HD9, HDAC, HDAC7, HDAC7B, HDAC9B, HDAC9FL, HDRP, MITR, histone deacetylase 9
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1TQE
Band
7p21.1 · 12|12 A3
Bgee
oocyte · monocyte · secondary oocyte · endothelial cell · Epithelium of choroid plexus
BioGPS
n/a

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Map overview Semantic statistics

HDAC9

Nodes31
Edges30
Triples169
Avg. degree1.94
Density0.064516
Components1

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HDAC9

Top relations

Gene ontology · 39
HDAC9 → B cell activation, B cell differentiation, cellular response to insulin stimulus, cholesterol homeostasis, chromatin organization, cytoplasm, development of the heart, histone deacetylase activity, histone deacetylase activity (H4-K16 specific), histone deacetylase binding, histone deacetylase complex, histone deacetylation, histone H3 deacetylation, histone H4 deacetylation, histone H4-K16 deacetylation, histone methyltransferase complex, hydrolase activity, inflammatory response, metal ion binding, NAD-dependent histone deacetylase activity (H3-K14 specific)
Bgee · 19
HDAC9 → ascending aorta, dentate gyrus of hippocampal formation granule cell, endothelial cell, Epithelium of choroid plexus, ganglionic eminence, gonad, interventricular septum, left ventricle, monocyte, neural layer of retina, oocyte, parotid gland, piriform cortex, Region I of hippocampus proper, secondary oocyte, Skeletal muscle tissue of rectus abdominis, ventricular zone, visual cortex, zygote
RNA expression pattern · 19
HDAC9 → ascending aorta, dentate gyrus of hippocampal formation granule cell, endothelial cell, Epithelium of choroid plexus, ganglionic eminence, gonad, interventricular septum, left ventricle, monocyte, neural layer of retina, oocyte, parotid gland, piriform cortex, Region I of hippocampus proper, secondary oocyte, Skeletal muscle tissue of rectus abdominis, ventricular zone, visual cortex, zygote
related to Function · 14
HDAC9 → CtBP, DNA, HDACs, Histone, Histones, II HDACs, It, MEF2, MITR, Multiple, The, The MITR, This, Xenopus
related to ischemic brain injury · 11
HDAC9 → CTCF, CTCF/miR-383-5p/HDAC9, HDCA9, Histone, In, MCAO, Neurod1, OGD, OGD-induced, Silencing, Thus
related to intracranial aneurysm · 10
HDAC9 → BCL2L11, CDKN2B-AS1, Chinese, Data, IA, MMP-2, MMP-9, Oppositely, RP1, VEGF
related to Glioblastoma · 9
HDAC9 → Also, EGFR, HDAC9-knockdown, Hippo, Knockdown, Knockdown HDAC9, TAZ, TAZ-mediated EGFR, We
related to Motor innervation control of gene expression · 8
HDAC9 → AChR, By, Forced, Hdac9-null, HDACs, MEF2, Motor, These
related to Interactions · 7
HDAC9 → BTG2, CBX5, HDAC3, IKK1, IKK2, Myocyte-specific, SIN3A
related to External links · 6
HDAC9 → Medicine, Medicine Medical Subject Headings, MeSH, National Library, This, United States National Library

Important terminology Word statistics

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Important terminology

gene histone deacetylase expression bp protein human chromosome factor chr band mir-92a silencing encoded ischemic brain injury mouse mitr cell

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
HDAC93.5.1.981.00infobox
HDAC9AliasesHDAC9, HD7, HD7b, HD9, HDAC, HDAC7, HDAC7B, HDAC9B, HDAC9FL, HDRP, MITR, histone deacetylase 91.00infobox
HDAC9Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1TQE1.00infobox
HDAC9Band7p21.11.00infobox
HDAC9Band12|12 A31.00infobox
HDAC9Bgeeoocyte1.00infobox
HDAC9Bgeemonocyte1.00infobox
HDAC9Bgeesecondary oocyte1.00infobox
HDAC9Bgeeendothelial cell1.00infobox
HDAC9BgeeEpithelium of choroid plexus1.00infobox
HDAC9Bgeeparotid gland1.00infobox
HDAC9Bgeeganglionic eminence1.00infobox
HDAC9BgeeSkeletal muscle tissue of rectus abdominis1.00infobox
HDAC9Bgeeventricular zone1.00infobox
HDAC9Bgeegonad1.00infobox
HDAC9Bgeeinterventricular septum1.00infobox
HDAC9Bgeeneural layer of retina1.00infobox
HDAC9Bgeezygote1.00infobox
HDAC9Bgeedentate gyrus of hippocampal formation granule cell1.00infobox
HDAC9BgeeRegion I of hippocampus proper1.00infobox
HDAC9Bgeeascending aorta1.00infobox
HDAC9Bgeevisual cortex1.00infobox
HDAC9Bgeepiriform cortex1.00infobox
HDAC9Bgeeleft ventricle1.00infobox
HDAC9BioGPSn/a1.00infobox
HDAC9Chr.Chromosome 7 (human)1.00infobox
HDAC9Chr.Chromosome 12 (mouse)1.00infobox
HDAC9DatabasesNCBI: entry; OMA: entry1.00infobox
HDAC9End19,002,416 bp1.00infobox
HDAC9End34,967,094 bp1.00infobox

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