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BRD4: Interactions, Structure & Function

Bromodomain-containing protein 4 is a protein that in humans is encoded by the BRD4 gene.

Language: English [EN]
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BRD4 topic overview

The analysis highlights Interactions, Structure and Function as prominent areas in the source structure around BRD4.

Related topics
36
Source areas
5
Connected nodes
41
Extracted relationships
121
Concept neighborhoods
13
Bridge connections
41

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Interactions · 13 topics
Overview · 8 topics
Function · 5 topics
Role in cancer · 5 topics
Structure · 5 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases
BRD4, CAP, HUNK1, HUNKI, MCAP, bromodomain containing 4
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2I8N, 2LSP, 2MJV, 2OSS, 2OUO, 2YEL, 2YEM, 3MXF, 3P5O, 3SVF, 3SVG, 3U5J, 3U5K, 3U5L, 3UVW, 3UVX, 3UVY, 3UW9,…
Band
19p13.12 · 17 B1|17 17.39 cM
Bgee
buccal mucosa cell · sural nerve · tendon of biceps brachii · nipple · internal globus pallidus
BioGPS
More reference expression data
Chr.
Chromosome 19 (human) · Chromosome 17 (mouse)

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Structure

Function

Role in cancer

Interactions

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How BRD4 connects Entity context

The extracted context around BRD4 shows recurring relationship patterns in the source. For example, BRD4 → cellular response to DNA damage stimulus, chromatin binding, chromatin organization, chromatin remodeling, chromosome, condensed nuclear chromosome, cytosol, enzyme binding, lysine-acetylated histone binding, negative regulation of DNA damage checkpoint, nucleoplasm, nucleus, P-TEFb complex binding, p53 binding, positive regulation of G2/M transition of mitotic cell cycle, positive regulation of histone H3-K36 trimethylation, positive regulation of I-kappaB kinase/NF-kappaB signaling, positive regulation of transcription by RNA polymerase II, positive regulation of transcription elongation from RNA polymerase II promoter, positive regulation of transcription, DNA-templated Another extracted example is BRD4 → aortic valve, ascending aorta, blood, buccal mucosa cell, cardia, cumulus cell, genital tubercle, internal carotid artery, internal globus pallidus, nipple, pylorus, renal medulla, Rostral migratory stream, secondary oocyte, sural nerve, tail of embryo, tendon of biceps brachii, vena cava, zygote. Use these groups to spot repeated connection types before inspecting the individual relationships.

BRD4

Top relations

Gene ontology · 31
BRD4 → cellular response to DNA damage stimulus, chromatin binding, chromatin organization, chromatin remodeling, chromosome, condensed nuclear chromosome, cytosol, enzyme binding, lysine-acetylated histone binding, negative regulation of DNA damage checkpoint, nucleoplasm, nucleus, P-TEFb complex binding, p53 binding, positive regulation of G2/M transition of mitotic cell cycle, positive regulation of histone H3-K36 trimethylation, positive regulation of I-kappaB kinase/NF-kappaB signaling, positive regulation of transcription by RNA polymerase II, positive regulation of transcription elongation from RNA polymerase II promoter, positive regulation of transcription, DNA-templated
Bgee · 19
BRD4 → aortic valve, ascending aorta, blood, buccal mucosa cell, cardia, cumulus cell, genital tubercle, internal carotid artery, internal globus pallidus, nipple, pylorus, renal medulla, Rostral migratory stream, secondary oocyte, sural nerve, tail of embryo, tendon of biceps brachii, vena cava, zygote
RNA expression pattern · 19
BRD4 → aortic valve, ascending aorta, blood, buccal mucosa cell, cardia, cumulus cell, genital tubercle, internal carotid artery, internal globus pallidus, nipple, pylorus, renal medulla, Rostral migratory stream, secondary oocyte, sural nerve, tail of embryo, tendon of biceps brachii, vena cava, zygote
related to Interactions · 13
BRD4 → CTD, GATA1, II, JMJD6, Notably, P-TEFb, PID, RFC1, RFC2, RFC3, RFC4, RFC5, RNA
related to Structure · 8
BRD4 → BD1, BD2, II, P-TEFb, RNA, The, The C-terminal, The ET
related to Role in cancer · 4
BRD4 → BET, Most, Myc, NUT
Band · 2
BRD4 → 17 B1|17 17.39 cM, 19p13.12
Chr. · 2
BRD4 → Chromosome 17 (mouse), Chromosome 19 (human)
End · 2
BRD4 → 15,332,545 bp, 32,284,722 bp
is a · 2
BRD4 → major target of BET inhibitors, member of the BET

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

gene human bp domain chromosome bet chr band also 19 family protein location two c-terminal bromodomains p-tefb 15 members mouse

BRD4 relationships Subject–Predicate–Object triples

TTTA extracted 121 structured relationships around BRD4. Examples in this analysis include BRD4 → Aliases → BRD4, CAP, HUNK1, HUNKI, MCAP, bromodomain containing 4 and BRD4 → Available structures → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2I8N, 2LSP, 2MJV, 2OSS, 2OUO, 2YEL, 2YEM, 3MXF, 3P5O, 3SVF, 3SVG, 3U5J, 3U5K, 3U5L, 3UVW, 3UVX, 3UVY, 3UW9,…. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
BRD4AliasesBRD4, CAP, HUNK1, HUNKI, MCAP, bromodomain containing 41.00infobox
BRD4Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2I8N, 2LSP, 2MJV, 2OSS, 2OUO, 2YEL, 2YEM, 3MXF, 3P5O, 3SVF, 3SVG, 3U5J, 3U5K, 3U5L, 3UVW, 3UVX, 3UVY, 3UW9,…1.00infobox
BRD4Band19p13.121.00infobox
BRD4Band17 B1|17 17.39 cM1.00infobox
BRD4Bgeebuccal mucosa cell1.00infobox
BRD4Bgeesural nerve1.00infobox
BRD4Bgeetendon of biceps brachii1.00infobox
BRD4Bgeenipple1.00infobox
BRD4Bgeeinternal globus pallidus1.00infobox
BRD4Bgeepylorus1.00infobox
BRD4Bgeesecondary oocyte1.00infobox
BRD4Bgeecardia1.00infobox
BRD4Bgeerenal medulla1.00infobox
BRD4Bgeevena cava1.00infobox
BRD4BgeeRostral migratory stream1.00infobox
BRD4Bgeegenital tubercle1.00infobox
BRD4Bgeetail of embryo1.00infobox
BRD4Bgeecumulus cell1.00infobox
BRD4Bgeeblood1.00infobox
BRD4Bgeezygote1.00infobox
BRD4Bgeeinternal carotid artery1.00infobox
BRD4Bgeeascending aorta1.00infobox
BRD4Bgeeaortic valve1.00infobox
BRD4BioGPSMore reference expression data1.00infobox
BRD4Chr.Chromosome 19 (human)1.00infobox
BRD4Chr.Chromosome 17 (mouse)1.00infobox
BRD4DatabasesNCBI: entry; OMA: entry1.00infobox
BRD4End15,332,545 bp1.00infobox
BRD4End32,284,722 bp1.00infobox
BRD4EnsemblENSG000001418671.00infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around BRD4 bring nearby vocabulary together. In this analysis, examples include Gene, Also and Domain. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • BRD4
    • Gene
    • Also
    • Domain
    • Bet
    • Activity
    • C-terminal
    • Family
    • Ii
    • Interaction
    • P-tefb
    • Polymerase
    • Rna
  • brd4
    • Gene
    • Also
    • Domain
    • Bet
    • Activity
    • C-terminal
    • Family
    • Ii
    • Interaction
    • P-tefb
    • Polymerase
    • Rna
  • gene
    • Human
    • Location
    • Chromosome
    • Protein
    • Bp
    • Chr
    • End
    • Function
    • Mouse
    • Search
    • C-terminal
    • Ii
  • bromodomains
    • Two
    • Contains
    • End
    • Function
    • Members
    • Mouse
    • Search
    • Sequence
    • Activity
    • C-terminal
    • Family
    • Ii
  • gene transcription
    • Human
    • Location
    • Chromosome
    • Protein
    • Bp
    • Chr
    • End
    • Function
    • Mouse
    • Search
    • C-terminal
    • Ii
  • function
    • Search
    • Location
    • Bp
    • Chr
    • Chromosome
    • End
    • Human
    • Mouse
    • Activity
    • Ii
    • Kinase
    • P-tefb
  • bet inhibitors
    • Family
    • Members
    • Also
    • Brd4
    • Domain
    • Brd2
    • Bromodomain
    • Contains
    • Sequence
    • Bromodomains
    • C-terminal
    • Two
  • rna polymerase ii
    • P-tefb
    • Polymerase
    • Rna
    • Interaction
    • Kinase
    • Mouse
    • Search
    • Implicated
    • Location
    • Protein
    • Two

Connections between topic areas Semantic bridges

For BRD4, one of the stronger structural bridges in this analysis connects BRD4 with Interactions. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
BRD4Interactions · splits 28 ⟂ 14
BRD4Overview · splits 33 ⟂ 9
BRD4Structure · splits 36 ⟂ 6
BRD4Function · splits 36 ⟂ 6
BRD4Role in cancer · splits 36 ⟂ 6

Map overview Semantic statistics

BRD4

Nodes42
Edges41
Triples121
Avg. degree1.95
Density0.047619
Components1

Source & methodology

TTTA analyzes the structure around BRD4 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Interactions, Structure & Function, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — BRD4 · EN edition · Analysis: TopicsToTalkAbout

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