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Cyclin-dependent kinase 9: Interactions, Function & Overview

Cyclin-dependent kinase 9 or CDK9 is a cyclin-dependent kinase associated with P-TEFb.

Language: English [EN]
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Cyclin-dependent kinase 9 topic overview

The analysis highlights Interactions, Function and Overview as prominent areas in the source structure around Cyclin-dependent kinase 9.

Related topics
17
Source areas
3
Connected nodes
20
Extracted relationships
122
Concept neighborhoods
9
Bridge connections
20

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Interactions · 12 topics
Function · 3 topics
Overview · 2 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

2.7.11.22
2.7.11.23
Aliases
CDK9, C-2k, CDC2L4, CTK1, PITALRE, TAK, cyclin-dependent kinase 9, cyclin dependent kinase 9
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3BLH, 3BLQ, 3BLR, 3LQ5, 3MI9, 3MIA, 3MY1, 3TN8, 3TNH, 3TNI, 4BCF, 4BCG, 4BCH, 4BCI, 4BCJ, 4EC8, 4EC9, 4IMY,…
Band
9q34.11 · 2|2 B
Bgee
right uterine tube · left ovary · right ovary · sural nerve · left uterine tube

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Function

Interactions

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How Cyclin-dependent kinase 9 connects Entity context

The extracted context around Cyclin-dependent kinase 9 shows recurring relationship patterns in the source. For example, Cyclin-dependent kinase 9 → 7SK snRNA binding, ATP binding, cell population proliferation, cellular response to cytokine stimulus, cellular response to DNA damage stimulus, chromatin binding, chromosome, cyclin binding, cyclin-dependent protein kinase holoenzyme complex, cyclin-dependent protein serine/threonine kinase activity, cyclin/CDK positive transcription elongation factor complex, cytoplasm, cytoplasmic ribonucleoprotein granule, DNA binding, DNA repair, kinase activity, membrane, negative regulation of mRNA polyadenylation, nucleoplasm, nucleotide binding Another extracted example is Cyclin-dependent kinase 9 → anterior pituitary, body of uterus, canal of the cervix, dermis, epiblast, fetal liver hematopoietic progenitor cell, gastric mucosa, granulocyte, left ovary, left uterine tube, primary visual cortex, right hemisphere of cerebellum, right ovary, right uterine tube, spleen, stroma of bone marrow, superior frontal gyrus, sural nerve, thymus, tibiofemoral joint. Use these groups to spot repeated connection types before inspecting the individual relationships.

Cyclin-dependent kinase 9

Top relations

Gene ontology · 54
Cyclin-dependent kinase 9 → 7SK snRNA binding, ATP binding, cell population proliferation, cellular response to cytokine stimulus, cellular response to DNA damage stimulus, chromatin binding, chromosome, cyclin binding, cyclin-dependent protein kinase holoenzyme complex, cyclin-dependent protein serine/threonine kinase activity, cyclin/CDK positive transcription elongation factor complex, cytoplasm, cytoplasmic ribonucleoprotein granule, DNA binding, DNA repair, kinase activity, membrane, negative regulation of mRNA polyadenylation, nucleoplasm, nucleotide binding
Bgee · 20
Cyclin-dependent kinase 9 → anterior pituitary, body of uterus, canal of the cervix, dermis, epiblast, fetal liver hematopoietic progenitor cell, gastric mucosa, granulocyte, left ovary, left uterine tube, primary visual cortex, right hemisphere of cerebellum, right ovary, right uterine tube, spleen, stroma of bone marrow, superior frontal gyrus, sural nerve, thymus, tibiofemoral joint
RNA expression pattern · 20
Cyclin-dependent kinase 9 → anterior pituitary, body of uterus, canal of the cervix, dermis, epiblast, fetal liver hematopoietic progenitor cell, gastric mucosa, granulocyte, left ovary, left uterine tube, primary visual cortex, right hemisphere of cerebellum, right ovary, right uterine tube, spleen, stroma of bone marrow, superior frontal gyrus, sural nerve, thymus, tibiofemoral joint
Band · 2
Cyclin-dependent kinase 9 → 2|2 B, 9q34.11
Chr. · 2
Cyclin-dependent kinase 9 → Chromosome 2 (mouse), Chromosome 9 (human)
End · 2
Cyclin-dependent kinase 9 → 127,790,792 bp, 32,603,088 bp
2.7.11.22 · 1
Cyclin-dependent kinase 9 → ↗
2.7.11.23 · 1
Cyclin-dependent kinase 9 → ↗
Aliases · 1
Cyclin-dependent kinase 9 → CDK9, C-2k, CDC2L4, CTK1, PITALRE, TAK, cyclin-dependent kinase 9, cyclin dependent kinase 9
Available structures · 1
Cyclin-dependent kinase 9 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3BLH, 3BLQ, 3BLR, 3LQ5, 3MI9, 3MIA, 3MY1, 3TN8, 3TNH, 3TNI, 4BCF, 4BCG, 4BCH, 4BCI, 4BCJ, 4EC8, 4EC9, 4IMY,…

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

cdk9 kinase human bp gene chr chromosome band cyclin-dependent cyclin cdk location protein complex p-tefb activity inhibitors mouse ii ucsc

Cyclin-dependent kinase 9 relationships Subject–Predicate–Object triples

TTTA extracted 122 structured relationships around Cyclin-dependent kinase 9. Examples in this analysis include Cyclin-dependent kinase 9 → 2.7.11.22 → ↗ and Cyclin-dependent kinase 9 → Aliases → CDK9, C-2k, CDC2L4, CTK1, PITALRE, TAK, cyclin-dependent kinase 9, cyclin dependent kinase 9. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
Cyclin-dependent kinase 92.7.11.221.00infobox
Cyclin-dependent kinase 92.7.11.231.00infobox
Cyclin-dependent kinase 9AliasesCDK9, C-2k, CDC2L4, CTK1, PITALRE, TAK, cyclin-dependent kinase 9, cyclin dependent kinase 91.00infobox
Cyclin-dependent kinase 9Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3BLH, 3BLQ, 3BLR, 3LQ5, 3MI9, 3MIA, 3MY1, 3TN8, 3TNH, 3TNI, 4BCF, 4BCG, 4BCH, 4BCI, 4BCJ, 4EC8, 4EC9, 4IMY,…1.00infobox
Cyclin-dependent kinase 9Band9q34.111.00infobox
Cyclin-dependent kinase 9Band2|2 B1.00infobox
Cyclin-dependent kinase 9Bgeeright uterine tube1.00infobox
Cyclin-dependent kinase 9Bgeeleft ovary1.00infobox
Cyclin-dependent kinase 9Bgeeright ovary1.00infobox
Cyclin-dependent kinase 9Bgeesural nerve1.00infobox
Cyclin-dependent kinase 9Bgeeleft uterine tube1.00infobox
Cyclin-dependent kinase 9Bgeegastric mucosa1.00infobox
Cyclin-dependent kinase 9Bgeeright hemisphere of cerebellum1.00infobox
Cyclin-dependent kinase 9Bgeeanterior pituitary1.00infobox
Cyclin-dependent kinase 9Bgeebody of uterus1.00infobox
Cyclin-dependent kinase 9Bgeecanal of the cervix1.00infobox
Cyclin-dependent kinase 9Bgeegranulocyte1.00infobox
Cyclin-dependent kinase 9Bgeestroma of bone marrow1.00infobox
Cyclin-dependent kinase 9Bgeesuperior frontal gyrus1.00infobox
Cyclin-dependent kinase 9Bgeethymus1.00infobox
Cyclin-dependent kinase 9Bgeefetal liver hematopoietic progenitor cell1.00infobox
Cyclin-dependent kinase 9Bgeetibiofemoral joint1.00infobox
Cyclin-dependent kinase 9Bgeeprimary visual cortex1.00infobox
Cyclin-dependent kinase 9Bgeedermis1.00infobox
Cyclin-dependent kinase 9Bgeeepiblast1.00infobox
Cyclin-dependent kinase 9Bgeespleen1.00infobox
Cyclin-dependent kinase 9BioGPSMore reference expression data1.00infobox
Cyclin-dependent kinase 9Chr.Chromosome 9 (human)1.00infobox
Cyclin-dependent kinase 9Chr.Chromosome 2 (mouse)1.00infobox
Cyclin-dependent kinase 9DatabasesNCBI: entry; OMA: entry1.00infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around Cyclin-dependent kinase 9 bring nearby vocabulary together. In this analysis, examples include Kinase, Function and Search. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • Cyclin-dependent kinase 9
    • Kinase
    • Function
    • Search
    • Activity
    • Chromosome
    • Location
    • Cdk9
    • Bp
    • Chr
    • Cyclin
    • External
    • Gene
  • cyclin-dependent kinase 9
    • Kinase
    • Function
    • Search
    • Activity
    • Location
    • Chromosome
    • Cyclin
    • Cdk9
    • Gene
    • Human
    • Bp
    • C-terminal
  • cyclin-dependent kinase
    • Kinase
    • Function
    • Search
    • Activity
    • Location
    • Chromosome
    • Cyclin
    • Cdk9
    • Gene
    • Human
    • Bp
    • C-terminal
  • function
    • Search
    • Activity
    • Chromosome
    • External
    • Location
    • Bp
    • Chr
    • Cyclin
    • 7sk
    • Also
    • Binding
    • C-terminal
  • c-terminal
    • Rna
    • Transcription
    • Ii
    • Complex
    • Cell
    • End
    • Function
    • Mouse
    • Search
    • Tak
    • Kinase
    • P-tefb
  • rna polymerase ii
    • Transcription
    • Rna
    • Complex
    • Search
    • Tak
    • Kinase
    • Mouse
    • P-tefb
    • Ucsc
    • Protein
    • Location
  • rnap ii
    • Rna
    • Transcription
    • Complex
    • Kinase
    • Mouse
    • Search
    • Tak
    • P-tefb
    • Protein
    • Ucsc
    • Location
  • p-tefb
    • Rna
    • Tak
    • Transcription

Connections between topic areas Semantic bridges

For Cyclin-dependent kinase 9, one of the stronger structural bridges in this analysis connects Cyclin-dependent kinase 9 with Interactions. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
Cyclin-dependent kinase 9Interactions · splits 8 ⟂ 13
Cyclin-dependent kinase 9Function · splits 17 ⟂ 4
Cyclin-dependent kinase 9Overview · splits 18 ⟂ 3

Map overview Semantic statistics

Cyclin-dependent kinase 9

Nodes21
Edges20
Triples122
Avg. degree1.9
Density0.095238
Components1

Source & methodology

TTTA analyzes the structure around Cyclin-dependent kinase 9 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Interactions, Function & Overview, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — Cyclin-dependent kinase 9 · EN edition · Analysis: TopicsToTalkAbout

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