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UBE2D1: Interactions & Overview

Ubiquitin-conjugating enzyme E2 D1 is a protein that in humans is encoded by the UBE2D1 gene.

Language: English [EN]
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UBE2D1 topic overview

The analysis highlights Interactions and Overview as prominent areas in the source structure around UBE2D1.

Related topics
6
Source areas
2
Connected nodes
8
Extracted relationships
91
Concept neighborhoods
5
Bridge connections
8

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Interactions · 4 topics
Overview · 2 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

2.3.2.23
2.3.2.24
Aliases
UBE2D1, E2(17)KB1, SFT, UBC4/5, UBCH5, UBCH5A, ubiquitin conjugating enzyme E2 D1
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2C4P, 2YHO, 3OJ4, 3PTF, 4AP4, 4QPL, 5FER
Band
10q21.1 · 10|10 B5.3
Bgee
biceps brachii · Skeletal muscle tissue of biceps brachii · Skeletal muscle tissue of rectus abdominis · vastus lateralis muscle · right ventricle

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Interactions

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How UBE2D1 connects Entity context

The extracted context around UBE2D1 shows recurring relationship patterns in the source. For example, UBE2D1 → anaphase-promoting complex-dependent catabolic process, ATP binding, BMP signaling pathway, cytoplasm, cytosol, MyD88-independent toll-like receptor signaling pathway, negative regulation of transcription by RNA polymerase II, nucleoplasm, nucleotide binding, positive regulation of protein polyubiquitination, positive regulation of protein ubiquitination, protein binding, protein deubiquitination, protein K48-linked ubiquitination, protein polyubiquitination, protein targeting to peroxisome, protein ubiquitination, protein-containing complex, regulation of mitotic cell cycle phase transition, TRIF-dependent toll-like receptor signaling pathway Another extracted example is UBE2D1 → ankle, biceps brachii, body of tongue, gastrocnemius muscle, genital tubercle, interventricular septum, monocyte, muscle of thigh, quadriceps femoris muscle, right ventricle, skeletal muscle tissue, Skeletal muscle tissue of biceps brachii, Skeletal muscle tissue of rectus abdominis, sternocleidomastoid muscle, tail of embryo, temporal muscle, thoracic diaphragm, triceps brachii muscle, vastus lateralis muscle. Use these groups to spot repeated connection types before inspecting the individual relationships.

UBE2D1

Top relations

Gene ontology · 25
UBE2D1 → anaphase-promoting complex-dependent catabolic process, ATP binding, BMP signaling pathway, cytoplasm, cytosol, MyD88-independent toll-like receptor signaling pathway, negative regulation of transcription by RNA polymerase II, nucleoplasm, nucleotide binding, positive regulation of protein polyubiquitination, positive regulation of protein ubiquitination, protein binding, protein deubiquitination, protein K48-linked ubiquitination, protein polyubiquitination, protein targeting to peroxisome, protein ubiquitination, protein-containing complex, regulation of mitotic cell cycle phase transition, TRIF-dependent toll-like receptor signaling pathway
Bgee · 19
UBE2D1 → ankle, biceps brachii, body of tongue, gastrocnemius muscle, genital tubercle, interventricular septum, monocyte, muscle of thigh, quadriceps femoris muscle, right ventricle, skeletal muscle tissue, Skeletal muscle tissue of biceps brachii, Skeletal muscle tissue of rectus abdominis, sternocleidomastoid muscle, tail of embryo, temporal muscle, thoracic diaphragm, triceps brachii muscle, vastus lateralis muscle
RNA expression pattern · 19
UBE2D1 → ankle, biceps brachii, body of tongue, gastrocnemius muscle, genital tubercle, interventricular septum, monocyte, muscle of thigh, quadriceps femoris muscle, right ventricle, skeletal muscle tissue, Skeletal muscle tissue of biceps brachii, Skeletal muscle tissue of rectus abdominis, sternocleidomastoid muscle, tail of embryo, temporal muscle, thoracic diaphragm, triceps brachii muscle, vastus lateralis muscle
Band · 2
UBE2D1 → 10q21.1, 10|10 B5.3
Chr. · 2
UBE2D1 → Chromosome 10 (human), Chromosome 10 (mouse)
End · 2
UBE2D1 → 58,370,751 bp, 71,121,092 bp
related to Interactions · 2
UBE2D1 → BARD1, BRCA1
2.3.2.23 · 1
UBE2D1 → ↗
2.3.2.24 · 1
UBE2D1 → ↗
Aliases · 1
UBE2D1 → UBE2D1, E2(17)KB1, SFT, UBC4/5, UBCH5, UBCH5A, ubiquitin conjugating enzyme E2 D1

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

bp enzyme gene chr human band chromosome 10 protein e2 location ubiquitin-conjugating ubiquitin mouse ubiquitin-protein ubiquitination d1 function conjugating search

UBE2D1 relationships Subject–Predicate–Object triples

TTTA extracted 91 structured relationships around UBE2D1. Examples in this analysis include UBE2D1 → 2.3.2.23 → ↗ and UBE2D1 → Aliases → UBE2D1, E2(17)KB1, SFT, UBC4/5, UBCH5, UBCH5A, ubiquitin conjugating enzyme E2 D1. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
UBE2D12.3.2.231.00infobox
UBE2D12.3.2.241.00infobox
UBE2D1AliasesUBE2D1, E2(17)KB1, SFT, UBC4/5, UBCH5, UBCH5A, ubiquitin conjugating enzyme E2 D11.00infobox
UBE2D1Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2C4P, 2YHO, 3OJ4, 3PTF, 4AP4, 4QPL, 5FER1.00infobox
UBE2D1Band10q21.11.00infobox
UBE2D1Band10|10 B5.31.00infobox
UBE2D1Bgeebiceps brachii1.00infobox
UBE2D1BgeeSkeletal muscle tissue of biceps brachii1.00infobox
UBE2D1BgeeSkeletal muscle tissue of rectus abdominis1.00infobox
UBE2D1Bgeevastus lateralis muscle1.00infobox
UBE2D1Bgeeright ventricle1.00infobox
UBE2D1Bgeemuscle of thigh1.00infobox
UBE2D1Bgeemonocyte1.00infobox
UBE2D1Bgeegastrocnemius muscle1.00infobox
UBE2D1Bgeebody of tongue1.00infobox
UBE2D1Bgeethoracic diaphragm1.00infobox
UBE2D1Bgeeinterventricular septum1.00infobox
UBE2D1Bgeetriceps brachii muscle1.00infobox
UBE2D1Bgeesternocleidomastoid muscle1.00infobox
UBE2D1Bgeequadriceps femoris muscle1.00infobox
UBE2D1Bgeetail of embryo1.00infobox
UBE2D1Bgeetemporal muscle1.00infobox
UBE2D1Bgeegenital tubercle1.00infobox
UBE2D1Bgeeskeletal muscle tissue1.00infobox
UBE2D1Bgeeankle1.00infobox
UBE2D1BioGPSMore reference expression data1.00infobox
UBE2D1Chr.Chromosome 10 (human)1.00infobox
UBE2D1Chr.Chromosome 10 (mouse)1.00infobox
UBE2D1DatabasesNCBI: entry; OMA: entry1.00infobox
UBE2D1End58,370,751 bp1.00infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around UBE2D1 bring nearby vocabulary together. In this analysis, examples include Activity, Conjugating and Function. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • UBE2D1
    • Activity
    • Conjugating
    • Function
    • Gene
    • Search
    • Ubiquitin
    • Location
    • Chromosome
    • Human
    • Bp
    • Chr
    • Cellular
  • ube2d1
    • Activity
    • Conjugating
    • Function
    • Gene
    • Search
    • Ubiquitin
    • Location
    • Chromosome
    • Human
    • Bp
    • Chr
    • Cellular
  • protein
    • Transcription
    • Ubiquitin-protein
    • Ubiquitination
    • Ube2d1
    • Cellular
    • Encoded
    • Gene
    • Humans
    • Targeting
    • Activity
    • B5
    • Conjugating
  • gene
    • Location
    • Chromosome
    • Human
    • Ube2d1
    • Bp
    • Chr
    • Activity
    • B5
    • Conjugating
    • End
    • Function
    • Mouse
  • interactions
    • Reading
    • References
    • Search
    • Sft
    • Ubiquitin
    • Location
    • Human
    • Ube2d1

Connections between topic areas Semantic bridges

For UBE2D1, one of the stronger structural bridges in this analysis connects UBE2D1 with Interactions. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
UBE2D1Interactions · splits 4 ⟂ 5
UBE2D1Overview · splits 6 ⟂ 3

Map overview Semantic statistics

UBE2D1

Nodes9
Edges8
Triples91
Avg. degree1.78
Density0.222222
Components1

Source & methodology

TTTA analyzes the structure around UBE2D1 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Interactions & Overview, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — UBE2D1 · EN edition · Analysis: TopicsToTalkAbout

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