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Phytochrome

Phytochromes are a class of photoreceptor proteins found in plants, bacteria and fungi. They respond to light in the red and far-red regions of the visible spectrum and can be classed as either Type I, which are activated by far-red light, or Type II that are activated by red light. Recent advances have suggested that phytochromes also act as temperature…

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Key facts & relationships

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AlphaFold
IPR013515 · PF00360
Available protein structures:
IPR013515 · PF00360
InterPro
IPR013515
PDB
IPR013515 PF00360 (ECOD; PDBsum)
Pfam
PF00360
Symbol
Phytochrome

Topics to explore

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Overview

Structure

Isoforms and states

Biochemistry

Discovery

Genetic engineering

Advanced semantic analysis

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Map overview Semantic statistics

Phytochrome

Nodes79
Edges78
Triples58
Avg. degree1.97
Density0.025316
Components1

How this topic connects Entity context

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Phytochrome

Top relations

related to Structure · 12
Phytochrome → Domain, Each, GAF, However C-terminal, In, N-terminal, PAS, PHY, Phytochromes, The, The PAS, Together
related to Isoforms and states · 11
Phytochrome → But, Hence, Here, In, Pfr, Photochromic, Phytochromes, Pr, The, This, When Pfr
related to Discovery · 10
Phytochrome → Butler, Center, Harold Siegelman, Harry Borthwick, Maryland, Sterling Hendricks, The, USDA-ARS Beltsville Agricultural Research, Using, Warren Butler
related to Genetic engineering · 8
Phytochrome → Around, As, England, Harry Smith, In, Leicester University, PIF, This
related to Biochemistry · 5
Phytochrome → Bilins, Chemically, In, It, The
related to Phytochromes' effect on tropisms · 4
Phytochrome → In, The, These, This
AlphaFold · 2
Phytochrome → IPR013515, PF00360
Available protein structures: · 2
Phytochrome → IPR013515, PF00360
InterPro · 1
Phytochrome → IPR013515
PDB · 1
Phytochrome → IPR013515 PF00360 (ECOD; PDBsum)

Important terminology Word statistics

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Important terminology

light phytochromes red plants plant protein far-red gene pfr citation needed also structure form many chromophore state synechocystis domain pr

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
PhytochromeAlphaFoldIPR0135151.00infobox
PhytochromeAlphaFoldPF003601.00infobox
PhytochromeAvailable protein structures:IPR0135151.00infobox
PhytochromeAvailable protein structures:PF003601.00infobox
PhytochromeInterProIPR0135151.00infobox
PhytochromePDBIPR013515 PF00360 (ECOD; PDBsum)1.00infobox
PhytochromePfamPF003601.00infobox
PhytochromeSymbolPhytochrome1.00infobox
Phytochromerelated to BiochemistryChemically0.60section
Phytochromerelated to BiochemistryIt0.60section
Phytochromerelated to BiochemistryThe0.60section
Phytochromerelated to BiochemistryBilins0.60section

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    Min side: 3
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