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Oxalobacter formigenes: Culture & Standards

Oxalobacter formigenes is a Gram negative oxalate-degrading anaerobic bacterium that was first isolated from the gastrointestinal tract of a sheep in 1985. To date, the bacterium has been found to colonize the large intestines of numerous vertebrates, including humans, and has even been isolated from freshwater sediment. It processes oxalate by…

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Oxalobacter formigenes topic overview

The analysis highlights Culture and Standards as prominent areas in the source structure around Oxalobacter formigenes.

Related topics
33
Source areas
7
Connected nodes
40
Extracted relationships
10
Concept neighborhoods
18
Bridge connections
40

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Overview · 14 topics
Taxonomy · 7 topics
Antibiotic resistance and susceptibility · 3 topics
Growth in culture · 3 topics
Clinical significance · 2 topics
Metabolism · 2 topics
Prevalence in the mammalian gut · 2 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Taxonomy

Metabolism

Growth in culture

Antibiotic resistance and susceptibility

Prevalence in the mammalian gut

Clinical significance

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How Oxalobacter formigenes connects Entity context

The extracted context around Oxalobacter formigenes shows recurring relationship patterns in the source. For example, Oxalobacter formigenes → Halogeton, However, In, Oxalobacter, The, This Another extracted example is Oxalobacter formigenes → Gram negative oxalate-degrading anaerobic bacterium that was first isolated from the gastrointestinal tract of a sheep in 1985. Use these groups to spot repeated connection types before inspecting the individual relationships.

Oxalobacter formigenes

Top relations

related to Ruminants · 6
Oxalobacter formigenes → Halogeton, However, In, Oxalobacter, The, This
is a · 1
Oxalobacter formigenes → Gram negative oxalate-degrading anaerobic bacterium that was first isolated from the gastrointestinal tract of a sheep in 1985

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

formigenes oxalate kidney oxalyl-coa bacterium primary oxalobacter isolated growth bacteria oxalate-degrading sheep decarboxylase humans gut anaerobic using found source calcium

Oxalobacter formigenes relationships Subject–Predicate–Object triples

TTTA extracted 10 structured relationships around Oxalobacter formigenes. Examples in this analysis include Oxalobacter formigenes → is a → Gram negative oxalate-degrading anaerobic bacterium that was first isolated from the gastrointestinal tract of a sheep in 1985 and qPCR → instance of → O. formigenes is presence is detected using molecular methods. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
Oxalobacter formigenesis aGram negative oxalate-degrading anaerobic bacterium that was first isolated from the gastrointestinal tract of a sheep in 19850.90text
qPCRinstance ofO. formigenes is presence is detected using molecular methods0.80text
next generation sequencing.HumansHumans are not typically born with O. formigenesinstance ofO. formigenes is presence is detected using molecular methods0.80text
only become colonized when they begin crawling around in their environmentinstance ofO. formigenes is presence is detected using molecular methods0.80text
Oxalobacter formigenesrelated to RuminantsThe0.60section
Oxalobacter formigenesrelated to RuminantsHalogeton0.60section
Oxalobacter formigenesrelated to RuminantsHowever0.60section
Oxalobacter formigenesrelated to RuminantsThis0.60section
Oxalobacter formigenesrelated to RuminantsIn0.60section
Oxalobacter formigenesrelated to RuminantsOxalobacter0.60section

Related concept clusters Concept neighborhoods

The concept neighborhoods around Oxalobacter formigenes bring nearby vocabulary together. In this analysis, examples include Genome, Sheep and Kidney. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • Oxalobacter formigenes
    • Genome
    • Sheep
    • Kidney
    • Antibiotic
    • Biomass
    • Degradation
    • Disease
    • Hyperoxaluria
    • Oxalobacter
    • Stones
    • Tract
    • Cell
  • oxalobacter formigenes
    • Genome
    • Oxalate
    • Sheep
    • Kidney
    • Primary
    • Antibiotic
    • Biomass
    • Degradation
    • Disease
    • Hyperoxaluria
    • Oxalobacter
    • Stones
  • oxalate
    • Kidney
    • Primary
    • Calcium
    • Cell
    • Source
    • Stone
    • Oxalyl-coa
    • Biomass
    • Degradation
    • Disease
    • Hyperoxaluria
    • Stones
  • kidney stones
    • Stone
    • Primary
    • Disease
    • Stones
    • Oxalate
    • Antibiotic
    • Hyperoxaluria
    • Source
    • Oxalobacter
    • Tract
    • Genome
    • Biomass
  • bacterium
    • Gastrointestinal
    • Tract
    • Isolated
    • Degradation
    • Large
    • Stones
    • Calcium
    • Decarboxylase
    • Found
    • Humans
    • Source
    • Oxalate-degrading
  • gastrointestinal (gi) tract
    • Gastrointestinal
    • Tract
    • Bacterium
    • Isolated
    • Degradation
    • Stones
    • Anaerobic
    • Calcium
    • Decarboxylase
    • Found
    • Source
    • Oxalate-degrading
  • oxalobacter aliiformigenes
    • Genome
    • Sheep
    • Kidney
    • Antibiotic
    • Biomass
    • Degradation
    • Disease
    • Hyperoxaluria
    • Stones
    • Tract
    • Cell
    • Gut
  • oxalobacter paeniformigenes
    • Genome
    • Sheep
    • Kidney
    • Antibiotic
    • Biomass
    • Degradation
    • Disease
    • Hyperoxaluria
    • Stones
    • Tract
    • Cell
    • Gut

Connections between topic areas Semantic bridges

For Oxalobacter formigenes, one of the stronger structural bridges in this analysis connects Oxalobacter formigenes with Overview. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
Oxalobacter formigenesOverview · splits 26 ⟂ 15
Oxalobacter formigenesTaxonomy · splits 33 ⟂ 8
Oxalobacter formigenesGrowth in culture · splits 37 ⟂ 4
Oxalobacter formigenesAntibiotic resistance and susceptibility · splits 37 ⟂ 4
Oxalobacter formigenesMetabolism · splits 38 ⟂ 3
Oxalobacter formigenesPrevalence in the mammalian gut · splits 38 ⟂ 3
Oxalobacter formigenesClinical significance · splits 38 ⟂ 3

Map overview Semantic statistics

Oxalobacter formigenes

Nodes41
Edges40
Triples10
Avg. degree1.95
Density0.04878
Components1

Source & methodology

TTTA analyzes the structure around Oxalobacter formigenes to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Culture & Standards, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — Oxalobacter formigenes · EN edition · Analysis: TopicsToTalkAbout

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