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Oxalobacter paraformigenes: Standards, Taxonomy & Genome

Oxalobacter paraformigenes is a Gram negative, non-spore-forming, oxalate-degrading anaerobic bacterium that was first isolated from human fecal samples. O. paraformigenes may have a role in calcium oxalate kidney stone disease because of its unique ability to utilize oxalate as its primary carbon source.

Language: English [EN]
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Oxalobacter paraformigenes topic overview

The analysis highlights Standards, Taxonomy and Genome as prominent areas in the source structure around Oxalobacter paraformigenes.

Related topics
12
Source areas
3
Connected nodes
15
Extracted relationships
11
Concept neighborhoods
11
Bridge connections
15

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Overview · 6 topics
Taxonomy · 5 topics
Genome · 1 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Taxonomy

Genome

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How Oxalobacter paraformigenes connects Entity context

The extracted context around Oxalobacter paraformigenes shows recurring relationship patterns in the source. For example, Oxalobacter paraformigenes → Based, CoA, DNA, Greek, However, HOxBLS, II, Oxalobacter, RNA, The Another extracted example is Oxalobacter paraformigenes → Gram negative. Use these groups to spot repeated connection types before inspecting the individual relationships.

Oxalobacter paraformigenes

Top relations

related to Taxonomy · 10
Oxalobacter paraformigenes → Based, CoA, DNA, Greek, However, HOxBLS, II, Oxalobacter, RNA, The
is a · 1
Oxalobacter paraformigenes → Gram negative

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

paraformigenes formigenes genome oxalobacter anaerobic oxalate species human taxonomy sequencing gene strain hoxbls group ii used content slightly hungate tubes

Oxalobacter paraformigenes relationships Subject–Predicate–Object triples

TTTA extracted 11 structured relationships around Oxalobacter paraformigenes. Examples in this analysis include Oxalobacter paraformigenes → is a → Gram negative and Oxalobacter paraformigenes → related to Taxonomy → Oxalobacter. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
Oxalobacter paraformigenesis aGram negative0.90text
Oxalobacter paraformigenesrelated to TaxonomyOxalobacter0.60section
Oxalobacter paraformigenesrelated to TaxonomyBased0.60section
Oxalobacter paraformigenesrelated to TaxonomyRNA0.60section
Oxalobacter paraformigenesrelated to TaxonomyDNA0.60section
Oxalobacter paraformigenesrelated to TaxonomyCoA0.60section
Oxalobacter paraformigenesrelated to TaxonomyHOxBLS0.60section
Oxalobacter paraformigenesrelated to TaxonomyII0.60section
Oxalobacter paraformigenesrelated to TaxonomyHowever0.60section
Oxalobacter paraformigenesrelated to TaxonomyThe0.60section
Oxalobacter paraformigenesrelated to TaxonomyGreek0.60section

Related concept clusters Concept neighborhoods

The concept neighborhoods around Oxalobacter paraformigenes bring nearby vocabulary together. In this analysis, examples include Bacterium, Fecal and First. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • Oxalobacter paraformigenes
    • Bacterium
    • Fecal
    • First
    • Gram
    • Isolated
    • Negative
    • Non-spore-forming
    • Oxalate-degrading
    • Samples
    • Human
    • Taxonomy
    • Anaerobic
  • oxalobacter paraformigenes
    • Bacterium
    • Fecal
    • First
    • Gram
    • Isolated
    • Negative
    • Non-spore-forming
    • Oxalate-degrading
    • Samples
    • Formigenes
    • Genome
    • Human
  • oxalobacter formigenes
    • Species
    • Genome
    • Bacterium
    • Fecal
    • First
    • Gram
    • Isolated
    • Negative
    • Non-spore-forming
    • Oxalate-degrading
    • Samples
    • Paraformigenes
  • anaerobic
    • Hungate
    • Tubes
    • Bacterium
    • Fecal
    • First
    • Gram
    • Isolated
    • Negative
    • Non-spore-forming
    • Oxalate-degrading
    • Samples
    • Human
  • genome
    • Species
    • Formigenes
    • Paraformigenes
    • Content
    • Group
    • Hoxbls
    • Human
    • Ii
    • Oxalobacter
    • Sequencing
    • Strain
    • Taxonomy
  • gram negative
    • Bacterium
    • Fecal
    • First
    • Isolated
    • Negative
    • Non-spore-forming
    • Oxalate-degrading
    • Samples
    • Human
    • Oxalobacter
    • Anaerobic
    • Paraformigenes
  • calcium oxalate
    • Disease
    • Kidney
    • May
    • Role
    • Stone
    • Oxalate
    • Cell
    • Hungate
    • Tubes
    • Paraformigenes
  • human microbiome project
    • Fecal
    • Isolated
    • Negative
    • Non-spore-forming
    • Oxalate-degrading
    • Samples
    • Content
    • Oxalobacter
    • Paraformigenes
    • Genome

Connections between topic areas Semantic bridges

For Oxalobacter paraformigenes, one of the stronger structural bridges in this analysis connects Oxalobacter paraformigenes with Overview. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
Oxalobacter paraformigenes — Overview · splits 9 ⟂ 7
Oxalobacter paraformigenes — Taxonomy · splits 10 ⟂ 6

Map overview Semantic statistics

Oxalobacter paraformigenes

Nodes16
Edges15
Triples11
Avg. degree1.88
Density0.125
Components1

Source & methodology

TTTA analyzes the structure around Oxalobacter paraformigenes to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Standards, Taxonomy & Genome, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — Oxalobacter paraformigenes · EN edition · Analysis: TopicsToTalkAbout

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