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Oxalobacter paraformigenes

Oxalobacter paraformigenes is a Gram negative, non-spore-forming, oxalate-degrading anaerobic bacterium that was first isolated from human fecal samples. O. paraformigenes may have a role in calcium oxalate kidney stone disease because of its unique ability to utilize oxalate as its primary carbon source.

Standards, Taxonomy & Genome

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Explore the main themes, entities and connections around Oxalobacter paraformigenes. Start with the topic map, then use the sections below for research and deeper semantic analysis.

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Taxonomy

Oxalobacter formigenes Fatty acid 16S ribosomal RNA Oxalyl-CoA decarboxylase Formyl-CoA transferase

5 related topics

Genome

Human Microbiome Project

1 related topics

Overview

Gram negative Spore Oxalate Anaerobic Calcium oxalate

6 related topics

Topics to explore

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Overview

Gram negative Gram-negative bacteria
Spore
Oxalate
Anaerobic Anaerobic organism
Calcium oxalate
Kidney stone disease

Taxonomy

Genome

Human Microbiome Project

Advanced semantic analysis

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Map overview Semantic statistics

Oxalobacter paraformigenes

Nodes16

Edges15

Triples11

Avg. degree1.88

Density0.125

Components1

How this topic connects Entity context

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Oxalobacter paraformigenes

Top relations

related to Taxonomy · 10

Oxalobacter paraformigenes → Based, CoA, DNA, Greek, However, HOxBLS, II, Oxalobacter, RNA, The

is a · 1

Oxalobacter paraformigenes → Gram negative

Important terminology Word statistics

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Important terminology

paraformigenes formigenes genome oxalobacter anaerobic oxalate species human taxonomy sequencing gene strain hoxbls group ii used content slightly hungate tubes

Entity relationships Subject–Predicate–Object triples

Subject	Predicate	Object	Confidence	Src
Oxalobacter paraformigenes	is a	Gram negative	0.90	text
Oxalobacter paraformigenes	related to Taxonomy	Oxalobacter	0.60	section
Oxalobacter paraformigenes	related to Taxonomy	Based	0.60	section
Oxalobacter paraformigenes	related to Taxonomy	RNA	0.60	section
Oxalobacter paraformigenes	related to Taxonomy	DNA	0.60	section
Oxalobacter paraformigenes	related to Taxonomy	CoA	0.60	section
Oxalobacter paraformigenes	related to Taxonomy	HOxBLS	0.60	section
Oxalobacter paraformigenes	related to Taxonomy	II	0.60	section
Oxalobacter paraformigenes	related to Taxonomy	However	0.60	section
Oxalobacter paraformigenes	related to Taxonomy	The	0.60	section
Oxalobacter paraformigenes	related to Taxonomy	Greek	0.60	section

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Min side: 3

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