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TRAF4: Protein interactions & Overview

TNF receptor-associated factor 4 (TRAF4) also known as RING finger protein 83 (RNF83) is a protein that in humans is encoded by the TRAF4 gene.

Language: English [EN]
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TRAF4 topic overview

The analysis highlights Protein interactions and Overview as prominent areas in the source structure around TRAF4.

Related topics
12
Source areas
2
Connected nodes
14
Extracted relationships
102
Related term clusters
11
Bridge connections
14

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Overview · 7 topics
Protein interactions · 5 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

2.3.2.27
↗
Aliases
TRAF4, CART1, MLN62, RNF83, TNF receptor associated factor 4
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2EOD, 2YUC, 3ZJB, 4K8U, 4M4E
Band
17q11.2 · 11|11 B5
Bgee
olfactory zone of nasal mucosa · right uterine tube · mucosa of transverse colon · right lobe of thyroid gland · minor salivary glands
BioGPS
More reference expression data

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Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Protein interactions

For the semantics nerds

You can skip this section if you’re here for content ideas and keyword inspiration.

Advanced semantic analysis

How TRAF4 connects Entity context

The extracted context around TRAF4 shows recurring relationship patterns in the source. For example, TRAF4 → activation of NF-kappaB-inducing kinase activity, apoptotic process, bicellular tight junction, cell junction, cytoplasm, cytoskeleton, DNA binding, identical protein binding, intracellular anatomical structure, membrane, metal ion binding, multicellular organism development, nucleus, perinuclear region of cytoplasm, plasma membrane, positive regulation of JNK cascade, positive regulation of protein homodimerization activity, positive regulation of protein kinase activity, protein binding, protein kinase binding Another extracted example is TRAF4 → embryo, epiblast, gallbladder, ganglionic eminence, genital tubercle, left lobe of thyroid gland, mandibular prominence, minor salivary glands, mucosa of transverse colon, neural tube, olfactory zone of nasal mucosa, rectum, right kidney, right lobe of liver, right lobe of thyroid gland, right uterine tube, ventricular zone, yolk sac. Use these groups to spot repeated connection types before inspecting the individual relationships.

TRAF4

Top relations

Gene ontology · 30
TRAF4 → activation of NF-kappaB-inducing kinase activity, apoptotic process, bicellular tight junction, cell junction, cytoplasm, cytoskeleton, DNA binding, identical protein binding, intracellular anatomical structure, membrane, metal ion binding, multicellular organism development, nucleus, perinuclear region of cytoplasm, plasma membrane, positive regulation of JNK cascade, positive regulation of protein homodimerization activity, positive regulation of protein kinase activity, protein binding, protein kinase binding
Bgee · 18
TRAF4 → embryo, epiblast, gallbladder, ganglionic eminence, genital tubercle, left lobe of thyroid gland, mandibular prominence, minor salivary glands, mucosa of transverse colon, neural tube, olfactory zone of nasal mucosa, rectum, right kidney, right lobe of liver, right lobe of thyroid gland, right uterine tube, ventricular zone, yolk sac
RNA expression pattern · 18
TRAF4 → embryo, epiblast, gallbladder, ganglionic eminence, genital tubercle, left lobe of thyroid gland, mandibular prominence, minor salivary glands, mucosa of transverse colon, neural tube, olfactory zone of nasal mucosa, rectum, right kidney, right lobe of liver, right lobe of thyroid gland, right uterine tube, ventricular zone, yolk sac
related to Protein interactions · 10
TRAF4 → Alternatively, MAPK8/JNK, NAD, NF-kappa, NF-κB, NOD-Like Receptors NOD1, NOD2, NOD2-RIP2, NTR, NTR/NTSR1
Band · 2
TRAF4 → 11|11 B5, 17q11.2
Chr. · 2
TRAF4 → Chromosome 11 (mouse), Chromosome 17 (human)
End · 2
TRAF4 → 28,750,956 bp, 78,056,415 bp
2.3.2.27 · 1
TRAF4 → ↗
Aliases · 1
TRAF4 → TRAF4, CART1, MLN62, RNF83, TNF receptor associated factor 4
Available structures · 1
TRAF4 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2EOD, 2YUC, 3ZJB, 4K8U, 4M4E

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

protein tnf bp factor chr human band gene activation receptor chromosome 17 known receptors location traf proteins mouse nf-κb complex

TRAF4 relationships Subject–Predicate–Object triples

TTTA extracted 102 structured relationships around TRAF4. Examples in this analysis include TRAF4 → 2.3.2.27 → ↗ and TRAF4 → Aliases → TRAF4, CART1, MLN62, RNF83, TNF receptor associated factor 4. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
TRAF42.3.2.27↗1.00infobox
TRAF4AliasesTRAF4, CART1, MLN62, RNF83, TNF receptor associated factor 41.00infobox
TRAF4Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2EOD, 2YUC, 3ZJB, 4K8U, 4M4E1.00infobox
TRAF4Band17q11.21.00infobox
TRAF4Band11|11 B51.00infobox
TRAF4Bgeeolfactory zone of nasal mucosa1.00infobox
TRAF4Bgeeright uterine tube1.00infobox
TRAF4Bgeemucosa of transverse colon1.00infobox
TRAF4Bgeeright lobe of thyroid gland1.00infobox
TRAF4Bgeeminor salivary glands1.00infobox
TRAF4Bgeeleft lobe of thyroid gland1.00infobox
TRAF4Bgeeright lobe of liver1.00infobox
TRAF4Bgeeganglionic eminence1.00infobox
TRAF4Bgeegallbladder1.00infobox
TRAF4Bgeerectum1.00infobox
TRAF4Bgeeyolk sac1.00infobox
TRAF4Bgeeright kidney1.00infobox
TRAF4Bgeeneural tube1.00infobox
TRAF4Bgeeepiblast1.00infobox
TRAF4Bgeeventricular zone1.00infobox
TRAF4Bgeeembryo1.00infobox
TRAF4Bgeegenital tubercle1.00infobox
TRAF4Bgeemandibular prominence1.00infobox
TRAF4BioGPSMore reference expression data1.00infobox
TRAF4Chr.Chromosome 17 (human)1.00infobox
TRAF4Chr.Chromosome 11 (mouse)1.00infobox
TRAF4DatabasesNCBI: entry; OMA: entry1.00infobox
TRAF4End28,750,956 bp1.00infobox
TRAF4End78,056,415 bp1.00infobox
TRAF4EnsemblENSG000000766041.00infobox

Related concept clusters Related term clusters

The concept neighborhoods around TRAF4 bring nearby vocabulary together. In this analysis, examples include Factor, Tnf and Receptor. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • TRAF4
    • Factor
    • Tnf
    • Receptor
    • Gene
    • Activity
    • Associated
    • Cellular
    • Interact
    • Protein
    • Rnf83
    • Search
    • Complex
  • traf4
    • Factor
    • Tnf
    • Receptor
    • Gene
    • Activity
    • Associated
    • Cellular
    • Interact
    • Protein
    • Rnf83
    • Search
    • Complex
  • protein
    • Activation
    • Gene
    • Tnf
    • Activity
    • Jnk
    • Rnf83
    • Search
    • Traf4
    • Complex
    • Location
    • Receptor
    • Chromosome
  • gene
    • Location
    • Chromosome
    • Human
    • Activity
    • Bp
    • Chr
    • End
    • Mouse
    • Rnf83
    • Search
    • Protein
    • Traf4
  • tnf receptors
    • Nf-κb
    • Traf4
    • Activation
    • Associated
    • Proteins
    • Rnf83
    • Traf
    • Protein
    • Known
    • Receptor
    • Receptors
    • Tnf
  • mitogen-activated protein kinases
    • Activation
    • Gene
    • Tnf
    • Activity
    • Jnk
    • Rnf83
    • Search
    • Traf4
    • Complex
    • Location
    • Receptor
    • Chromosome
  • protein interactions
    • Activation
    • Gene
    • Tnf
    • Activity
    • Jnk
    • Rnf83
    • Search
    • Traf4
    • Complex
    • Location
    • Receptor
    • Chromosome
  • neurotrophin receptor
    • Activity
    • Associated
    • Search
    • Location
    • Traf4
    • Chromosome
    • Human
    • Bp
    • Cell
    • Chr
    • Tnf
    • Cellular

Connections between topic areas Semantic bridges

For TRAF4, one of the stronger structural bridges in this analysis connects TRAF4 with Overview. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
TRAF4 — Overview · splits 7 ⟂ 8
TRAF4 — Protein interactions · splits 9 ⟂ 6

Map overview Semantic statistics

TRAF4

Nodes15
Edges14
Triples102
Avg. degree1.87
Density0.133333
Components1

Source & methodology

TTTA analyzes the structure around TRAF4 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Protein interactions & Overview, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — TRAF4 · EN edition · Analysis: TopicsToTalkAbout

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