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TP53BP1: DNA repair, Interactions & Clinical significance

Tumor suppressor p53-binding protein 1 also known as p53-binding protein 1 or 53BP1 is a protein that in humans is encoded by the TP53BP1 gene.

Language: English [EN]
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TP53BP1 topic overview

The analysis highlights DNA repair, Interactions and Clinical significance as prominent areas in the source structure around TP53BP1.

Related topics
17
Source areas
4
Connected nodes
21
Extracted relationships
97
Concept neighborhoods
13
Bridge connections
21

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

DNA repair · 8 topics
Interactions · 6 topics
Overview · 2 topics
Clinical significance · 1 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases
TP53BP1, 53BP1, p202, p53BP1, TP53, TDRD30, tumor protein p53 binding protein 1
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1GZH, 1KZY, 1XNI, 2G3R, 2IG0, 2LVM, 2MWO, 2MWP, 3LGF, 3LGL, 3LH0, 4CRI, 4RG2, 4X34, 5ECG
Band
15q15.3 · 2|2 E5
Bgee
pituitary gland · anterior pituitary · gonad · ventricular zone · stromal cell of endometrium
BioGPS
More reference expression data
Chr.
Chromosome 15 (human) · Chromosome 2 (mouse)

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Clinical significance

DNA repair

Interactions

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How TP53BP1 connects Entity context

The extracted context around TP53BP1 shows recurring relationship patterns in the source. For example, TP53BP1 → cellular response to DNA damage stimulus, cellular response to X-ray, chromosome, chromosome, centromeric region, cytoplasm, damaged DNA binding, DNA binding, DNA damage checkpoint signaling, DNA repair, DNA repair complex, double-strand break repair via nonhomologous end joining, histone binding, kinetochore, methylated histone binding, negative regulation of double-strand break repair via homologous recombination, nuclear body, nucleoplasm, nucleus, p53 binding, positive regulation of DNA-binding transcription factor activity Another extracted example is TP53BP1 → Achilles tendon, anterior pituitary, aortic valve, ascending aorta, ciliary body, condyle, fossa, ganglionic eminence, gonad, middle temporal gyrus, pituitary gland, primary oocyte, renal corpuscle, right uterine tube, Rostral migratory stream, secondary oocyte, stromal cell of endometrium, substantia nigra, sural nerve, ventricular zone. Use these groups to spot repeated connection types before inspecting the individual relationships.

TP53BP1

Top relations

Gene ontology · 34
TP53BP1 → cellular response to DNA damage stimulus, cellular response to X-ray, chromosome, chromosome, centromeric region, cytoplasm, damaged DNA binding, DNA binding, DNA damage checkpoint signaling, DNA repair, DNA repair complex, double-strand break repair via nonhomologous end joining, histone binding, kinetochore, methylated histone binding, negative regulation of double-strand break repair via homologous recombination, nuclear body, nucleoplasm, nucleus, p53 binding, positive regulation of DNA-binding transcription factor activity
Bgee · 20
TP53BP1 → Achilles tendon, anterior pituitary, aortic valve, ascending aorta, ciliary body, condyle, fossa, ganglionic eminence, gonad, middle temporal gyrus, pituitary gland, primary oocyte, renal corpuscle, right uterine tube, Rostral migratory stream, secondary oocyte, stromal cell of endometrium, substantia nigra, sural nerve, ventricular zone
RNA expression pattern · 20
TP53BP1 → Achilles tendon, anterior pituitary, aortic valve, ascending aorta, ciliary body, condyle, fossa, ganglionic eminence, gonad, middle temporal gyrus, pituitary gland, primary oocyte, renal corpuscle, right uterine tube, Rostral migratory stream, secondary oocyte, stromal cell of endometrium, substantia nigra, sural nerve, ventricular zone
Band · 2
TP53BP1 → 15q15.3, 2|2 E5
Chr. · 2
TP53BP1 → Chromosome 15 (human), Chromosome 2 (mouse)
End · 2
TP53BP1 → 121,101,888 bp, 43,510,728 bp
Aliases · 1
TP53BP1 → TP53BP1, 53BP1, p202, p53BP1, TP53, TDRD30, tumor protein p53 binding protein 1
Available structures · 1
TP53BP1 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1GZH, 1KZY, 1XNI, 2G3R, 2IG0, 2LVM, 2MWO, 2MWP, 3LGF, 3LGL, 3LH0, 4CRI, 4RG2, 4X34, 5ECG
BioGPS · 1
TP53BP1 → More reference expression data
Databases · 1
TP53BP1 → NCBI: entry; OMA: entry

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

53bp1 bp chr human chromosome band 15 gene protein repair nhej dna end location p53 dsbs mouse double-strand process tumor

TP53BP1 relationships Subject–Predicate–Object triples

TTTA extracted 97 structured relationships around TP53BP1. Examples in this analysis include TP53BP1 → Aliases → TP53BP1, 53BP1, p202, p53BP1, TP53, TDRD30, tumor protein p53 binding protein 1 and TP53BP1 → Available structures → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1GZH, 1KZY, 1XNI, 2G3R, 2IG0, 2LVM, 2MWO, 2MWP, 3LGF, 3LGL, 3LH0, 4CRI, 4RG2, 4X34, 5ECG. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
TP53BP1AliasesTP53BP1, 53BP1, p202, p53BP1, TP53, TDRD30, tumor protein p53 binding protein 11.00infobox
TP53BP1Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1GZH, 1KZY, 1XNI, 2G3R, 2IG0, 2LVM, 2MWO, 2MWP, 3LGF, 3LGL, 3LH0, 4CRI, 4RG2, 4X34, 5ECG1.00infobox
TP53BP1Band15q15.31.00infobox
TP53BP1Band2|2 E51.00infobox
TP53BP1Bgeepituitary gland1.00infobox
TP53BP1Bgeeanterior pituitary1.00infobox
TP53BP1Bgeegonad1.00infobox
TP53BP1Bgeeventricular zone1.00infobox
TP53BP1Bgeestromal cell of endometrium1.00infobox
TP53BP1BgeeAchilles tendon1.00infobox
TP53BP1Bgeeright uterine tube1.00infobox
TP53BP1Bgeeganglionic eminence1.00infobox
TP53BP1Bgeemiddle temporal gyrus1.00infobox
TP53BP1Bgeesural nerve1.00infobox
TP53BP1Bgeeprimary oocyte1.00infobox
TP53BP1Bgeeascending aorta1.00infobox
TP53BP1Bgeesubstantia nigra1.00infobox
TP53BP1Bgeesecondary oocyte1.00infobox
TP53BP1Bgeeciliary body1.00infobox
TP53BP1Bgeefossa1.00infobox
TP53BP1Bgeerenal corpuscle1.00infobox
TP53BP1BgeeRostral migratory stream1.00infobox
TP53BP1Bgeeaortic valve1.00infobox
TP53BP1Bgeecondyle1.00infobox
TP53BP1BioGPSMore reference expression data1.00infobox
TP53BP1Chr.Chromosome 15 (human)1.00infobox
TP53BP1Chr.Chromosome 2 (mouse)1.00infobox
TP53BP1DatabasesNCBI: entry; OMA: entry1.00infobox
TP53BP1End43,510,728 bp1.00infobox
TP53BP1End121,101,888 bp1.00infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around TP53BP1 bring nearby vocabulary together. In this analysis, examples include Gene, Binding and Search. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • TP53BP1
    • Gene
    • Binding
    • Search
    • Tumor
    • Location
    • P53
    • Chromosome
    • Dna
    • Human
    • Bp
    • Chr
    • External
  • tp53bp1
    • Gene
    • Binding
    • Search
    • Tumor
    • Location
    • P53
    • Chromosome
    • Dna
    • Human
    • Bp
    • Chr
    • External
  • protein
    • P53
    • Tp53bp1
    • Gene
    • 53bp1
    • Available
    • Binding
    • Histone
    • Pdb
    • Q12888
    • Search
    • Tumor
    • Uniprot
  • gene
    • Location
    • Tp53bp1
    • Chromosome
    • Human
    • Protein
    • Binding
    • Bp
    • Chr
    • Mouse
    • Search
    • Tumor
    • P53
  • repairing dna double-strand breaks (dsbs)
    • Double-strand
    • Homologous
    • Binding
    • Cell
    • Hr
    • Repair
    • Search
    • Dsbs
    • Location
    • Nhej
    • P53
    • Tp53bp1
  • dna repair
    • Double-strand
    • Process
    • Binding
    • Cell
    • Homologous
    • Repair
    • Search
    • Hr
    • Joining
    • Location
    • P53
    • Tp53bp1
  • cell cycle
    • Double-strand
    • Dna
    • Histone
    • Homologous
    • Joining
    • Mouse
    • Q12888
    • Search
    • Uniprot
    • Hr
    • Location
    • P53
  • p53
    • Protein
    • Histone
    • Pdb
    • Q12888
    • Search
    • Uniprot
    • Location
    • Tp53bp1
    • Human
    • Repair
    • Cell
    • Homologous

Connections between topic areas Semantic bridges

For TP53BP1, one of the stronger structural bridges in this analysis connects TP53BP1 with DNA repair. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
TP53BP1DNA repair · splits 13 ⟂ 9
TP53BP1Interactions · splits 15 ⟂ 7
TP53BP1Overview · splits 19 ⟂ 3

Map overview Semantic statistics

TP53BP1

Nodes22
Edges21
Triples97
Avg. degree1.91
Density0.090909
Components1

Source & methodology

TTTA analyzes the structure around TP53BP1 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as DNA repair, Interactions & Clinical significance, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — TP53BP1 · EN edition · Analysis: TopicsToTalkAbout

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