Stromal cell-derived factor 1

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Stromal cell-derived factor 1 topic overview

The analysis highlights Function, Structure and Clinical significance as prominent areas in the source structure around Stromal cell-derived factor 1.

Related topics: 46
Source areas: 4
Connected nodes: 50
Extracted relationships: 137
Concept neighborhoods: 17
Bridge connections: 50

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Function · 17 topics

Overview · 14 topics

Structure · 8 topics

Clinical significance · 7 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases: CXCL12, IRH, PBSF, SCYB12, SDF1, TLSF, TPAR1, C-X-C motif chemokine ligand 12
Available structures: Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1A15, 1QG7, 1SDF, 1VMC, 2J7Z, 2K01, 2K03, 2K04, 2K05, 2KEC, 2KED, 2KEE, 2KOL, 2NWG, 2SDF, 3GV3, 3HP3, 4LMQ,…
Band: 10q11.21 · 6 54.81 cM|6 F1
Bgee: synovial joint · pericardium · lactiferous duct · skin of hip · trabecular bone
BioGPS: More reference expression data
Chr.: Chromosome 10 (human) · Chromosome 6 (mouse)

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Chemokine
Protein
Gene
Chromosome 10
Leukocytes Leukocyte
Lipopolysaccharide
TNF Tumor necrosis factors
IL1 Interleukin 1
Cysteines Cysteine
Disulfide bonds Disulfide bond
CC subfamily CC chemokine
CXC subfamily CXC chemokine
SNPs
Coronary artery disease

Structure

Function

Clinical significance

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How Stromal cell-derived factor 1 connects Entity context

The extracted context around Stromal cell-derived factor 1 shows recurring relationship patterns in the source. For example, Stromal cell-derived factor 1 → adult locomotory behavior, animal organ regeneration, antimicrobial humoral immune response mediated by antimicrobial peptide, axon guidance, blood circulation, brain development, cell adhesion, cell chemotaxis, cellular calcium ion homeostasis, cellular response to chemokine, chemoattractant activity, chemokine (C-X-C motif) ligand 12 signaling pathway, chemokine activity, chemokine receptor binding, chemokine-mediated signaling pathway, chemotaxis, collagen-containing extracellular matrix, CXCR chemokine receptor binding, cytokine activity, cytoplasm Another extracted example is Stromal cell-derived factor 1 → ankle, ankle joint, external carotid artery, gallbladder, Gonadal ridge, internal carotid artery, lactiferous duct, parietal pleura, pericardium, skin of hip, spleen, stroma of bone marrow, superficial temporal artery, synovial joint, synovial membrane, thymus, tibiofemoral joint, trabecular bone, vas deferens, vena cava. Use these groups to spot repeated connection types before inspecting the individual relationships.

Top relations

Gene ontology · 67

Stromal cell-derived factor 1 → adult locomotory behavior, animal organ regeneration, antimicrobial humoral immune response mediated by antimicrobial peptide, axon guidance, blood circulation, brain development, cell adhesion, cell chemotaxis, cellular calcium ion homeostasis, cellular response to chemokine, chemoattractant activity, chemokine (C-X-C motif) ligand 12 signaling pathway, chemokine activity, chemokine receptor binding, chemokine-mediated signaling pathway, chemotaxis, collagen-containing extracellular matrix, CXCR chemokine receptor binding, cytokine activity, cytoplasm

Bgee · 20

Stromal cell-derived factor 1 → ankle, ankle joint, external carotid artery, gallbladder, Gonadal ridge, internal carotid artery, lactiferous duct, parietal pleura, pericardium, skin of hip, spleen, stroma of bone marrow, superficial temporal artery, synovial joint, synovial membrane, thymus, tibiofemoral joint, trabecular bone, vas deferens, vena cava

RNA expression pattern · 20

Band · 2

Stromal cell-derived factor 1 → 10q11.21, 6 54.81 cM|6 F1

Chr. · 2

Stromal cell-derived factor 1 → Chromosome 10 (human), Chromosome 6 (mouse)

End · 2

Stromal cell-derived factor 1 → 117,158,328 bp, 44,386,493 bp

Aliases · 1

Stromal cell-derived factor 1 → CXCL12, IRH, PBSF, SCYB12, SDF1, TLSF, TPAR1, C-X-C motif chemokine ligand 12

Available structures · 1

Stromal cell-derived factor 1 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1A15, 1QG7, 1SDF, 1VMC, 2J7Z, 2K01, 2K03, 2K04, 2K05, 2KEC, 2KED, 2KEE, 2KOL, 2NWG, 2SDF, 3GV3, 3HP3, 4LMQ,…

BioGPS · 1

Stromal cell-derived factor 1 → More reference expression data

Databases · 1

Stromal cell-derived factor 1 → NCBI: entry; OMA: entry

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

cxcl12 gene chemokine receptor cxcr4 chromosome 10 bp band also brain chr protein human chemokines alzheimer's bone cell cells motif

Stromal cell-derived factor 1 relationships Subject–Predicate–Object triples

TTTA extracted 137 structured relationships around Stromal cell-derived factor 1. Examples in this analysis include Stromal cell-derived factor 1 → Aliases → CXCL12, IRH, PBSF, SCYB12, SDF1, TLSF, TPAR1, C-X-C motif chemokine ligand 12 and Stromal cell-derived factor 1 → Available structures → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1A15, 1QG7, 1SDF, 1VMC, 2J7Z, 2K01, 2K03, 2K04, 2K05, 2KEC, 2KED, 2KEE, 2KOL, 2NWG, 2SDF, 3GV3, 3HP3, 4LMQ,…. The table shows each extracted connection, where it came from and its confidence.

Subject	Predicate	Object	Confidence	Src
Stromal cell-derived factor 1	Aliases	CXCL12, IRH, PBSF, SCYB12, SDF1, TLSF, TPAR1, C-X-C motif chemokine ligand 12	1.00	infobox
Stromal cell-derived factor 1	Available structures	Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1A15, 1QG7, 1SDF, 1VMC, 2J7Z, 2K01, 2K03, 2K04, 2K05, 2KEC, 2KED, 2KEE, 2KOL, 2NWG, 2SDF, 3GV3, 3HP3, 4LMQ,…	1.00	infobox
Stromal cell-derived factor 1	Band	10q11.21	1.00	infobox
Stromal cell-derived factor 1	Band	6 54.81 cM\|6 F1	1.00	infobox
Stromal cell-derived factor 1	Bgee	synovial joint	1.00	infobox
Stromal cell-derived factor 1	Bgee	pericardium	1.00	infobox
Stromal cell-derived factor 1	Bgee	lactiferous duct	1.00	infobox
Stromal cell-derived factor 1	Bgee	skin of hip	1.00	infobox
Stromal cell-derived factor 1	Bgee	trabecular bone	1.00	infobox
Stromal cell-derived factor 1	Bgee	parietal pleura	1.00	infobox
Stromal cell-derived factor 1	Bgee	synovial membrane	1.00	infobox
Stromal cell-derived factor 1	Bgee	superficial temporal artery	1.00	infobox
Stromal cell-derived factor 1	Bgee	gallbladder	1.00	infobox
Stromal cell-derived factor 1	Bgee	vena cava	1.00	infobox
Stromal cell-derived factor 1	Bgee	stroma of bone marrow	1.00	infobox
Stromal cell-derived factor 1	Bgee	tibiofemoral joint	1.00	infobox
Stromal cell-derived factor 1	Bgee	Gonadal ridge	1.00	infobox
Stromal cell-derived factor 1	Bgee	vas deferens	1.00	infobox
Stromal cell-derived factor 1	Bgee	internal carotid artery	1.00	infobox
Stromal cell-derived factor 1	Bgee	spleen	1.00	infobox
Stromal cell-derived factor 1	Bgee	ankle	1.00	infobox
Stromal cell-derived factor 1	Bgee	ankle joint	1.00	infobox
Stromal cell-derived factor 1	Bgee	external carotid artery	1.00	infobox
Stromal cell-derived factor 1	Bgee	thymus	1.00	infobox
Stromal cell-derived factor 1	BioGPS	More reference expression data	1.00	infobox
Stromal cell-derived factor 1	Chr.	Chromosome 10 (human)	1.00	infobox
Stromal cell-derived factor 1	Chr.	Chromosome 6 (mouse)	1.00	infobox
Stromal cell-derived factor 1	Databases	NCBI: entry; OMA: entry	1.00	infobox
Stromal cell-derived factor 1	End	44,386,493 bp	1.00	infobox
Stromal cell-derived factor 1	End	117,158,328 bp	1.00	infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around Stromal cell-derived factor 1 bring nearby vocabulary together. In this analysis, examples include Motif, Chromosome and Expression. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

Stromal cell-derived factor 1
- Motif
- Chromosome
- Expression
- Protein
- Chemokine
- Receptor
- Gene
- Mouse
- Associated
- Band
- Damage
- Development
stromal cell-derived factor 1
- Motif
- Chromosome
- Expression
- Protein
- Chemokine
- Receptor
- Gene
- Mouse
- Associated
- Band
- Damage
- Development
chemokine
- Protein
- Motif
- Multiple
- Chromosome
- Factor
- Gene
- Damage
- Development
- Human
- Immune
- Blood
- Bp
gene
- Disease
- Human
- Motif
- Bp
- Chr
- Protein
- Mouse
- Band
- Increased
- Associated
- Cns
- Damage
chromosome 10
- Human
- Bp
- Chr
- Band
- Motif
- Gene
- Protein
- Factor
- Mouse
- Disease
- Cns
- Damage
receptor
- Factor
- Mouse
- Increased
- Motif
- Cxcl12
- Blood
- Expression
- Marrow
- Also
- Bone
- Cxcr4
- C-x-c
bone marrow
- Marrow
- Cells
- Expressed
- Blood
- Mouse
- Migration
- Brain
- Cxcr4
- Receptor
- Cxcl12
- C-x-c
- Damage
cxcr7 receptor
- Factor
- Mouse
- Increased
- Motif
- Cxcl12
- Blood
- Expression
- Marrow
- Also
- Bone
- Cxcr4
- C-x-c

Connections between topic areas Semantic bridges

For Stromal cell-derived factor 1, one of the stronger structural bridges in this analysis connects Stromal cell-derived factor 1 with Function. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3

Stromal cell-derived factor 1 — Function · splits 33 ⟂ 18

Stromal cell-derived factor 1 — Overview · splits 36 ⟂ 15

Stromal cell-derived factor 1 — Structure · splits 42 ⟂ 9

Stromal cell-derived factor 1 — Clinical significance · splits 43 ⟂ 8

Map overview Semantic statistics

Stromal cell-derived factor 1

Nodes51

Edges50

Triples137

Avg. degree1.96

Density0.039216

Components1

Source & methodology

TTTA analyzes the structure around Stromal cell-derived factor 1 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Function, Structure & Clinical significance, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — Stromal cell-derived factor 1 · EN edition · Analysis: TopicsToTalkAbout