SMARCA5

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Explore the main themes, entities and connections around SMARCA5. Start with the topic map, then use the sections below for research and deeper semantic analysis.

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Function

Helicase ATPase Transcription Chromatin remodeling RSF

6 related topics

Interactions

Interact RAD21 Histone deacetylase 2 POLE3 SATB1

6 related topics

Overview

Protein Gene

2 related topics

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases: SMARCA5, ISWI, SNF2H, WCRF135, hISWI, hSNF2H, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
Band: 4q31.21 · 8|8 C2
Bgee: ventricular zone · Achilles tendon · buccal mucosa cell · ganglionic eminence · Epithelium of choroid plexus
BioGPS: More reference expression data
Chr.: Chromosome 4 (human) · Chromosome 8 (mouse)
Databases: NCBI: entry; OMA: entry

Topics to explore

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Overview

Function

Interactions

Interact Protein-protein interaction
RAD21
Histone deacetylase 2
POLE3
SATB1
BAZ1A

Advanced semantic analysis

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Map overview Semantic statistics

Nodes18

Edges17

Triples96

Avg. degree1.89

Density0.111111

Components1

How this topic connects Entity context

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SMARCA5

Top relations

Gene ontology · 33

SMARCA5 → ATP binding, ATP-dependent activity, acting on DNA, ATPase activity, cellular response to leukemia inhibitory factor, CENP-A containing chromatin assembly, chromatin organization, chromatin remodeling, chromatin silencing complex, condensed chromosome, DNA binding, DNA-binding transcription factor activity, RNA polymerase II-specific, DNA-templated transcription, initiation, epigenetic maintenance of chromatin in transcription-competent conformation, fibrillar center, helicase activity, histone binding, hydrolase activity, hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, ISWI-type complex, nuclear replication fork

Bgee · 19

SMARCA5 → abdominal wall, Achilles tendon, buccal mucosa cell, corpus callosum, cumulus cell, epiblast, Epithelium of choroid plexus, epithelium of nasopharynx, ganglionic eminence, gonad, Gonadal ridge, mandibular prominence, maxillary prominence, migratory enteric neural crest cell, subthalamic nucleus, superior cervical ganglion, superior vestibular nucleus, tail of embryo, ventricular zone

RNA expression pattern · 19

related to Interactions · 5

SMARCA5 → BAZ1A, Histone, POLE3, RAD21, SATB1

Band · 2

SMARCA5 → 4q31.21, 8|8 C2

Chr. · 2

SMARCA5 → Chromosome 4 (human), Chromosome 8 (mouse)

End · 2

SMARCA5 → 143,557,486 bp, 81,466,126 bp

Aliases · 1

SMARCA5 → SMARCA5, ISWI, SNF2H, WCRF135, hISWI, hSNF2H, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5

BioGPS · 1

SMARCA5 → More reference expression data

Databases · 1

SMARCA5 → NCBI: entry; OMA: entry

Important terminology Word statistics

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Important terminology

bp gene chromatin chr human band protein chromosome encoded member location transcription mouse iswi remodeling swi regulator subfamily function 557

Entity relationships Subject–Predicate–Object triples

Subject	Predicate	Object	Confidence	Src
SMARCA5	Aliases	SMARCA5, ISWI, SNF2H, WCRF135, hISWI, hSNF2H, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	1.00	infobox
SMARCA5	Band	4q31.21	1.00	infobox
SMARCA5	Band	8\|8 C2	1.00	infobox
SMARCA5	Bgee	ventricular zone	1.00	infobox
SMARCA5	Bgee	Achilles tendon	1.00	infobox
SMARCA5	Bgee	buccal mucosa cell	1.00	infobox
SMARCA5	Bgee	ganglionic eminence	1.00	infobox
SMARCA5	Bgee	Epithelium of choroid plexus	1.00	infobox
SMARCA5	Bgee	corpus callosum	1.00	infobox
SMARCA5	Bgee	superior vestibular nucleus	1.00	infobox
SMARCA5	Bgee	subthalamic nucleus	1.00	infobox
SMARCA5	Bgee	epithelium of nasopharynx	1.00	infobox
SMARCA5	Bgee	gonad	1.00	infobox
SMARCA5	Bgee	tail of embryo	1.00	infobox
SMARCA5	Bgee	abdominal wall	1.00	infobox
SMARCA5	Bgee	Gonadal ridge	1.00	infobox
SMARCA5	Bgee	mandibular prominence	1.00	infobox
SMARCA5	Bgee	maxillary prominence	1.00	infobox
SMARCA5	Bgee	cumulus cell	1.00	infobox
SMARCA5	Bgee	epiblast	1.00	infobox
SMARCA5	Bgee	migratory enteric neural crest cell	1.00	infobox
SMARCA5	Bgee	superior cervical ganglion	1.00	infobox
SMARCA5	BioGPS	More reference expression data	1.00	infobox
SMARCA5	Chr.	Chromosome 4 (human)	1.00	infobox
SMARCA5	Chr.	Chromosome 8 (mouse)	1.00	infobox
SMARCA5	Databases	NCBI: entry; OMA: entry	1.00	infobox
SMARCA5	End	143,557,486 bp	1.00	infobox
SMARCA5	End	81,466,126 bp	1.00	infobox
SMARCA5	Ensembl	ENSG00000153147	1.00	infobox
SMARCA5	Entrez	8467	1.00	infobox

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