Rhodopsin

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Structure

Chemoreceptors Lipid bilayer Transmembrane domains Binding pocket Ligand

21 related topics

History

Franz Christian Boll Ancient Greek Wilhelm Friedrich Kühne George Wald Holoprotein

11 related topics

Phototransduction

Phototransduction IR spectroscopy UV/Vis Femtoseconds Picoseconds

15 related topics

General

Amino acids Wavelengths Cryptochrome

3 related topics

Key facts & relationships

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Aliases: RHO, CSNBAD1, OPN2, RP4, rhodopsin, Rhodopsin, visual purple
Available structures: Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes4ZWJ, 5DGY
Band: 3q22.1 · 6 E3|6 53.72 cM
Bgee: choroid · buccal mucosa cell · testicle · retina · retinal pigment epithelium
BioGPS: More reference expression data
Chr.: Chromosome 3 (human) · Chromosome 6 (mouse)

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Overview

History

Diseases of the retina

Advanced semantic analysis

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Map overview Semantic statistics

Nodes71

Edges70

Triples184

Avg. degree1.97

Density0.028169

Components1

How this topic connects Entity context

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Rhodopsin

Top relations

Gene ontology · 39

Rhodopsin → 11-cis retinal binding, absorption of visible light, cell projection, cell-cell junction, cellular response to light stimulus, ciliary membrane, detection of light stimulus, G protein-coupled photoreceptor activity, G protein-coupled receptor activity, G protein-coupled receptor signaling pathway, Golgi apparatus, Golgi membrane, Golgi-associated vesicle membrane, integral component of membrane, integral component of plasma membrane, membrane, metal ion binding, photoreceptor activity, photoreceptor cell maintenance, photoreceptor disc membrane

Bgee · 19

Rhodopsin → buccal mucosa cell, choroid, ciliary body, conjunctival fornix, corneal stroma, epithelium of lens, gastrula, iris, lower lobe of lung, neural layer of retina, occipital lobe, outer nuclear layer, pars reticulata, retina, retinal pigment epithelium, secondary oocyte, superior frontal gyrus, testicle, tibiofemoral joint

RNA expression pattern · 19

related to External links · 15

Rhodopsin → Archived, Fernandez, Jones BW, Kolb, March, Medicine Medical Subject Headings, MeSH, National Library, Nelson, The, The Rhodopsin ProteinPhotoisomerization, University, Utah, Wayback Machine, Webvision Home Page

related to Structure · 14

Rhodopsin → A-based, Also, Artificially, G-protein-coupled, GPCR, GPCRs, However, It, Opsins, Schiff-base, Such, The, Therefore, Thus

related to Activation · 13

Rhodopsin → CH, George Wald, II, In, IR, NH, Nobel, Schiff, Schiff's, The, This, UV/Vis, When

related to history · 10

Rhodopsin → Ancient Greek, Franz Christian Boll, G-protein-coupled, German, It, The, Today, When George Wald, When Wald, Wilhelm Friedrich Kühne

related to Deactivation · 9

Rhodopsin → During, Higher, II, In, Meta II, Meta III, Schiff, This, Whether

related to Diseases of the retina · 6

Rhodopsin → Golgi, In, Mutations, Other, Several, X-linked

related to Phototransduction cascade · 6

Rhodopsin → G-protein, Gt, GTP, Metarhodopsin II, The, This

Important terminology Word statistics

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Important terminology

light retinal protein opsin phototransduction gene visual binding receptor bp lysine chr human band ii meta 11-cis-retinal all-trans-retinal chromosome membrane

Entity relationships Subject–Predicate–Object triples

Subject	Predicate	Object	Confidence	Src
Rhodopsin	Aliases	RHO, CSNBAD1, OPN2, RP4, rhodopsin, Rhodopsin, visual purple	1.00	infobox
Rhodopsin	Available structures	Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes4ZWJ, 5DGY	1.00	infobox
Rhodopsin	Band	3q22.1	1.00	infobox
Rhodopsin	Band	6 E3\|6 53.72 cM	1.00	infobox
Rhodopsin	Bgee	choroid	1.00	infobox
Rhodopsin	Bgee	buccal mucosa cell	1.00	infobox
Rhodopsin	Bgee	testicle	1.00	infobox
Rhodopsin	Bgee	retina	1.00	infobox
Rhodopsin	Bgee	retinal pigment epithelium	1.00	infobox
Rhodopsin	Bgee	secondary oocyte	1.00	infobox
Rhodopsin	Bgee	lower lobe of lung	1.00	infobox
Rhodopsin	Bgee	pars reticulata	1.00	infobox
Rhodopsin	Bgee	superior frontal gyrus	1.00	infobox
Rhodopsin	Bgee	occipital lobe	1.00	infobox
Rhodopsin	Bgee	neural layer of retina	1.00	infobox
Rhodopsin	Bgee	epithelium of lens	1.00	infobox
Rhodopsin	Bgee	ciliary body	1.00	infobox
Rhodopsin	Bgee	iris	1.00	infobox
Rhodopsin	Bgee	corneal stroma	1.00	infobox
Rhodopsin	Bgee	conjunctival fornix	1.00	infobox
Rhodopsin	Bgee	gastrula	1.00	infobox
Rhodopsin	Bgee	outer nuclear layer	1.00	infobox
Rhodopsin	Bgee	tibiofemoral joint	1.00	infobox
Rhodopsin	BioGPS	More reference expression data	1.00	infobox
Rhodopsin	Chr.	Chromosome 3 (human)	1.00	infobox
Rhodopsin	Chr.	Chromosome 6 (mouse)	1.00	infobox
Rhodopsin	Databases	NCBI: entry; OMA: entry	1.00	infobox
Rhodopsin	End	129,535,344 bp	1.00	infobox
Rhodopsin	End	115,916,997 bp	1.00	infobox
Rhodopsin	Ensembl	ENSG00000163914	1.00	infobox

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