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PDCD6

Programmed cell death protein 6 is a protein that in humans is encoded by the PDCD6 gene.

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Aliases
PDCD6, ALG-2, PEF1B, ALG2, programmed cell death 6
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2ZN8, 2ZN9, 2ZND, 2ZNE, 2ZRS, 2ZRT, 3AAJ, 3AAK, 3WXA
Band
5p15.33 · 13|13 C1
Bgee
stromal cell of endometrium · mucosa of transverse colon · right adrenal cortex · prefrontal cortex · left adrenal gland
BioGPS
n/a
Chr.
Chromosome 5 (human) · Chromosome 13 (mouse)

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PDCD6

Nodes11
Edges10
Triples115
Avg. degree1.82
Density0.181818
Components1

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PDCD6

Top relations

Gene ontology · 46
PDCD6 → activation of cysteine-type endopeptidase activity involved in apoptotic process, angiogenesis, apoptotic process, apoptotic signaling pathway, calcium ion binding, calcium-dependent cysteine-type endopeptidase activity, calcium-dependent protein binding, cellular response to heat, COPII vesicle coat, COPII vesicle coating, Cul3-RING ubiquitin ligase complex, cytoplasm, cytoplasmic vesicle, endoplasmic reticulum, endoplasmic reticulum exit site, endoplasmic reticulum membrane, endoplasmic reticulum to Golgi vesicle-mediated transport, endosome, ER to Golgi transport vesicle membrane, extracellular exosome
Bgee · 20
PDCD6 → anterior pituitary, Brodmann area 9, duodenum, endocardial cushion, endothelial cell of lymphatic vessel, Epithelium of choroid plexus, epithelium of small intestine, fetal liver hematopoietic progenitor cell, gonad, ileum, jejunum, left adrenal cortex, left adrenal gland, mucosa of transverse colon, prefrontal cortex, rectum, right adrenal cortex, right kidney, stromal cell of endometrium, vestibular sensory epithelium
RNA expression pattern · 20
PDCD6 → anterior pituitary, Brodmann area 9, duodenum, endocardial cushion, endothelial cell of lymphatic vessel, Epithelium of choroid plexus, epithelium of small intestine, fetal liver hematopoietic progenitor cell, gonad, ileum, jejunum, left adrenal cortex, left adrenal gland, mucosa of transverse colon, prefrontal cortex, rectum, right adrenal cortex, right kidney, stromal cell of endometrium, vestibular sensory epithelium
related to Interactions · 5
PDCD6 → ANXA11, ASK1, Fas, PDCD6IP, PEF1
Band · 2
PDCD6 → 13|13 C1, 5p15.33
Chr. · 2
PDCD6 → Chromosome 13 (mouse), Chromosome 5 (human)
End · 2
PDCD6 → 314,974 bp, 74,465,699 bp
Aliases · 1
PDCD6 → PDCD6, ALG-2, PEF1B, ALG2, programmed cell death 6
Available structures · 1
PDCD6 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2ZN8, 2ZN9, 2ZND, 2ZNE, 2ZRS, 2ZRT, 3AAJ, 3AAK, 3WXA
BioGPS · 1
PDCD6 → n/a

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Important terminology

gene human bp protein chr band cell chromosome location programmed death product mouse ucsc calcium binding homodimerization external search 974

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
PDCD6AliasesPDCD6, ALG-2, PEF1B, ALG2, programmed cell death 61.00infobox
PDCD6Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2ZN8, 2ZN9, 2ZND, 2ZNE, 2ZRS, 2ZRT, 3AAJ, 3AAK, 3WXA1.00infobox
PDCD6Band5p15.331.00infobox
PDCD6Band13|13 C11.00infobox
PDCD6Bgeestromal cell of endometrium1.00infobox
PDCD6Bgeemucosa of transverse colon1.00infobox
PDCD6Bgeeright adrenal cortex1.00infobox
PDCD6Bgeeprefrontal cortex1.00infobox
PDCD6Bgeeleft adrenal gland1.00infobox
PDCD6Bgeeleft adrenal cortex1.00infobox
PDCD6Bgeerectum1.00infobox
PDCD6BgeeBrodmann area 91.00infobox
PDCD6Bgeegonad1.00infobox
PDCD6Bgeeanterior pituitary1.00infobox
PDCD6Bgeejejunum1.00infobox
PDCD6Bgeeduodenum1.00infobox
PDCD6Bgeeileum1.00infobox
PDCD6Bgeeepithelium of small intestine1.00infobox
PDCD6Bgeeright kidney1.00infobox
PDCD6Bgeeendothelial cell of lymphatic vessel1.00infobox
PDCD6BgeeEpithelium of choroid plexus1.00infobox
PDCD6Bgeevestibular sensory epithelium1.00infobox
PDCD6Bgeeendocardial cushion1.00infobox
PDCD6Bgeefetal liver hematopoietic progenitor cell1.00infobox
PDCD6BioGPSn/a1.00infobox
PDCD6Chr.Chromosome 5 (human)1.00infobox
PDCD6Chr.Chromosome 13 (mouse)1.00infobox
PDCD6DatabasesNCBI: entry; OMA: entry1.00infobox
PDCD6End314,974 bp1.00infobox
PDCD6End74,465,699 bp1.00infobox

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