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FOXA1: Clinical significance, Structure & Function

Forkhead box protein A1 (FOXA1), also known as hepatocyte nuclear factor 3-alpha (HNF-3A), is a protein that in humans is encoded by the FOXA1 gene.

Language: English [EN]
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FOXA1 topic overview

The analysis highlights Clinical significance, Structure and Function as prominent areas in the source structure around FOXA1.

Related topics
27
Source areas
5
Connected nodes
32
Extracted relationships
147
Concept neighborhoods
17
Bridge connections
32

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Clinical significance · 12 topics
Function · 5 topics
Structure · 5 topics
Chemical probe development · 3 topics
Overview · 2 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases
FOXA1, HNF3A, TCF3A, forkhead box A1
Band
14q21.1 · 12 C1|12 24.7 cM
Bgee
olfactory zone of nasal mucosa · epithelium of bronchus · bronchial epithelial cell · right lobe of liver · prostate
BioGPS
n/a
Chr.
Chromosome 14 (human) · Chromosome 12 (mouse)
Databases
NCBI: entry; OMA: entry

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Structure

Function

Clinical significance

Chemical probe development

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How FOXA1 connects Entity context

The extracted context around FOXA1 shows recurring relationship patterns in the source. For example, FOXA1 → alveolar secondary septum development, anatomical structure formation involved in morphogenesis, anatomical structure morphogenesis, cell differentiation, chromatin organization, chromatin remodeling, connective tissue development, DNA binding, DNA-binding transcription activator activity, RNA polymerase II-specific, DNA-binding transcription factor activity, DNA-binding transcription factor activity, RNA polymerase II-specific, dopaminergic neuron differentiation, dorsal/ventral neural tube patterning, epithelial cell maturation involved in prostate gland development, epithelial tube branching involved in lung morphogenesis, epithelial-mesenchymal signaling involved in prostate gland development, fibrillar center, glucose homeostasis, hormone metabolic process, lung development Another extracted example is FOXA1 → body of stomach, bronchial epithelial cell, epithelium of bronchus, epithelium of stomach, lacrimal gland, left colon, mucosa of paranasal sinus, mucosa of transverse colon, mucosa of urinary bladder, mucous cell of stomach, nasal epithelium, olfactory zone of nasal mucosa, Paneth cell, prostate, pyloric antrum, rectum, right lobe of liver, right lung lobe, substantia nigra, transitional epithelium of urinary bladder. Use these groups to spot repeated connection types before inspecting the individual relationships.

FOXA1

Top relations

Gene ontology · 54
FOXA1 → alveolar secondary septum development, anatomical structure formation involved in morphogenesis, anatomical structure morphogenesis, cell differentiation, chromatin organization, chromatin remodeling, connective tissue development, DNA binding, DNA-binding transcription activator activity, RNA polymerase II-specific, DNA-binding transcription factor activity, DNA-binding transcription factor activity, RNA polymerase II-specific, dopaminergic neuron differentiation, dorsal/ventral neural tube patterning, epithelial cell maturation involved in prostate gland development, epithelial tube branching involved in lung morphogenesis, epithelial-mesenchymal signaling involved in prostate gland development, fibrillar center, glucose homeostasis, hormone metabolic process, lung development
Bgee · 20
FOXA1 → body of stomach, bronchial epithelial cell, epithelium of bronchus, epithelium of stomach, lacrimal gland, left colon, mucosa of paranasal sinus, mucosa of transverse colon, mucosa of urinary bladder, mucous cell of stomach, nasal epithelium, olfactory zone of nasal mucosa, Paneth cell, prostate, pyloric antrum, rectum, right lobe of liver, right lung lobe, substantia nigra, transitional epithelium of urinary bladder
RNA expression pattern · 20
FOXA1 → body of stomach, bronchial epithelial cell, epithelium of bronchus, epithelium of stomach, lacrimal gland, left colon, mucosa of paranasal sinus, mucosa of transverse colon, mucosa of urinary bladder, mucous cell of stomach, nasal epithelium, olfactory zone of nasal mucosa, Paneth cell, prostate, pyloric antrum, rectum, right lobe of liver, right lung lobe, substantia nigra, transitional epithelium of urinary bladder
related to Chemical probe development · 7
FOXA1 → Being, DNA, DNA-dependent, FOXA1 C258, Scripps Research, Using, WX-02-23
related to Marker in breast cancer · 6
FOXA1 → Conversely, ERa, ERα, Expression, GATA3, PR
related to Role in cancer · 6
FOXA1 → DNA-binding, E-cadherin, EMT, Expression, Most, Twist1
related to Function · 4
FOXA1 → AR, DNA-binding, In, Similar
related to Structure · 4
FOXA1 → DNA, DNA-binding, O-GlcNAc, The
related to External links · 3
FOXA1 → FactorBookFOXA1 This, Medicine, United States National Library
Band · 2
FOXA1 → 12 C1|12 24.7 cM, 14q21.1

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

bp forkhead cancer factor chr human band gene chromosome 14 protein breast expression domain transcription erα prostate dna-binding signaling location

FOXA1 relationships Subject–Predicate–Object triples

TTTA extracted 147 structured relationships around FOXA1. Examples in this analysis include FOXA1 → Aliases → FOXA1, HNF3A, TCF3A, forkhead box A1 and FOXA1 → Band → 14q21.1. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
FOXA1AliasesFOXA1, HNF3A, TCF3A, forkhead box A11.00infobox
FOXA1Band14q21.11.00infobox
FOXA1Band12 C1|12 24.7 cM1.00infobox
FOXA1Bgeeolfactory zone of nasal mucosa1.00infobox
FOXA1Bgeeepithelium of bronchus1.00infobox
FOXA1Bgeebronchial epithelial cell1.00infobox
FOXA1Bgeeright lobe of liver1.00infobox
FOXA1Bgeeprostate1.00infobox
FOXA1Bgeerectum1.00infobox
FOXA1Bgeenasal epithelium1.00infobox
FOXA1Bgeemucosa of transverse colon1.00infobox
FOXA1Bgeemucosa of paranasal sinus1.00infobox
FOXA1Bgeebody of stomach1.00infobox
FOXA1Bgeemucosa of urinary bladder1.00infobox
FOXA1Bgeetransitional epithelium of urinary bladder1.00infobox
FOXA1Bgeeepithelium of stomach1.00infobox
FOXA1Bgeemucous cell of stomach1.00infobox
FOXA1Bgeelacrimal gland1.00infobox
FOXA1Bgeepyloric antrum1.00infobox
FOXA1BgeePaneth cell1.00infobox
FOXA1Bgeeright lung lobe1.00infobox
FOXA1Bgeeleft colon1.00infobox
FOXA1Bgeesubstantia nigra1.00infobox
FOXA1BioGPSn/a1.00infobox
FOXA1Chr.Chromosome 14 (human)1.00infobox
FOXA1Chr.Chromosome 12 (mouse)1.00infobox
FOXA1DatabasesNCBI: entry; OMA: entry1.00infobox
FOXA1End37,596,059 bp1.00infobox
FOXA1End57,593,702 bp1.00infobox
FOXA1EnsemblENSG000001295141.00infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around FOXA1 bring nearby vocabulary together. In this analysis, examples include Cancer, Breast and Prostate. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • FOXA1
    • Cancer
    • Breast
    • Prostate
    • Protein
    • Signaling
    • Transcription
    • Expression
    • Mutations
    • Dna-binding
    • Erα
    • Gene
    • Development
  • foxa1
    • Cancer
    • Breast
    • Prostate
    • Protein
    • Signaling
    • Transcription
    • Expression
    • Mutations
    • Dna-binding
    • Erα
    • Gene
    • Development
  • gene
    • Location
    • Chromosome
    • Human
    • Bp
    • C1
    • Chr
    • Development
    • End
    • Mouse
    • Structure
    • Function
    • Band
  • pioneer factor
    • Protein
    • Transcription
    • Gene
    • Signaling
    • Foxa1
    • Expression
    • Forkhead
    • C1
    • Development
    • End
    • Mouse
    • Structure
  • transcription factor
    • Factor
    • Protein
    • Transcription
    • Receptor
    • Prostate
    • Gene
    • Signaling
    • Foxa1
    • Expression
    • Forkhead
    • C1
    • Development
  • forkhead
    • Function
    • Dna-binding
    • Gene
    • A1
    • Development
    • Structure
    • Location
    • Chromosome
    • Domain
    • Human
    • Protein
    • Bp
  • function
    • Development
    • Structure
    • Location
    • Chromosome
    • Dna-binding
    • Domain
    • Gene
    • Human
    • Bp
    • Chr
    • External
    • C1
  • chemical probe development
    • Structure
    • Function
    • Location
    • Chromosome
    • External
    • Gene
    • Human
    • Bp
    • Chr
    • Forkhead
    • C1
    • End

Connections between topic areas Semantic bridges

For FOXA1, one of the stronger structural bridges in this analysis connects FOXA1 with Clinical significance. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
FOXA1Clinical significance · splits 20 ⟂ 13
FOXA1Structure · splits 27 ⟂ 6
FOXA1Function · splits 27 ⟂ 6
FOXA1Chemical probe development · splits 29 ⟂ 4
FOXA1Overview · splits 30 ⟂ 3

Map overview Semantic statistics

FOXA1

Nodes33
Edges32
Triples147
Avg. degree1.94
Density0.060606
Components1

Source & methodology

TTTA analyzes the structure around FOXA1 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Clinical significance, Structure & Function, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — FOXA1 · EN edition · Analysis: TopicsToTalkAbout

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