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Essential gene

Essential genes are indispensable genes for organisms to grow and reproduce offspring under certain environment. However, being essential is highly dependent on the circumstances in which an organism lives. For instance, a gene required to digest starch is only essential if starch is the only source of energy. Recently, systematic attempts have been made…

Applications, Conditionally essential genes & Prediction

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Overview

Eukaryotes

Viruses

Quantitative gene essentiality analysis

Conditionally essential genes

Gene duplications and alternative metabolic pathways

Conservation

Study

Reproducibility

Prediction

Essential protein domains

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Map overview Semantic statistics

Essential gene

Nodes94
Edges93
Triples132
Avg. degree1.98
Density0.021277
Components1

How this topic connects Entity context

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Essential gene

Top relations

related to Bacteria: genome-wide studies · 23
Essential gene → Clones, Counting, CRISPR, Deduced, Each, Essential, In, Includes, Insertion, Involved, Methods, Mutagenesis, Notes, Only, ORFs, PA14, PAO1, Project, RNA, Table
related to Viruses · 20
Essential gene → According, All, By, CMV, Copenhagen, Dobson, For, Genes, In, Most, ORFs, Screens, This, Tscharke, Vaccinia, Vaccinia Virus, VACV, Viruses, Western Reserve, WR
related to Conservation · 16
Essential gene → All, Among, Bacillota, ENP, Fang, For, Furthermore, Gamma-proteobacteria, In, NPNE, PNE, Saccharomyces, Schizosaccharomyces, The, They, This
related to Reproducibility · 15
Essential gene → At, Cas9, Comparison, CRISPR/cas9, Figure, For, If, Insertions, K562, RNAi, Screens, Such, Table, This, Transposon
related to Prediction · 13
Essential gene → As, Chen, Comparative, Essential, Haemophilus, However, It, Mushegian, Mycoplasma, Shortly, Some, They, This
related to External links · 12
Essential gene → Archived, Benjamin Lewin's Essential Genes, Database, Ecogene, EcoliWiki, Essential, Essential Genes, Essential GenesOGEE, Genome Scale, Online Essentiality DatabaseEGGS, Pearson/Prentice-Hall, Wayback Machine
related to Different essential genes in different organisms · 11
Essential gene → About, Another, Bacillus, Different, For, In Mycoplasma, Many, Porphyromonas, Stone, Streptococcus, Such
related to Gene duplications and alternative metabolic pathways · 8
Essential gene → Bacillus, By, For, However, In, Many, Such, Woods
related to Quantitative gene essentiality analysis · 5
Essential gene → For, However, If, In, Using CRISPR
related to Study · 5
Essential gene → In, Some, The, There, Therefore

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Important terminology

genes essential gene many genome organisms may coli et al found metabolic non-essential however used cell essentiality also species genomes

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
Essential generelated to Bacteria: genome-wide studiesTwo0.60section
Essential generelated to Bacteria: genome-wide studiesIn0.60section
Essential generelated to Bacteria: genome-wide studiesORFs0.60section
Essential generelated to Bacteria: genome-wide studiesInsertion0.60section
Essential generelated to Bacteria: genome-wide studiesThe0.60section
Essential generelated to Bacteria: genome-wide studiesWith0.60section
Essential generelated to Bacteria: genome-wide studiesCRISPR0.60section
Essential generelated to Bacteria: genome-wide studiesTable0.60section
Essential generelated to Bacteria: genome-wide studiesEssential0.60section
Essential generelated to Bacteria: genome-wide studiesMutagenesis0.60section
Essential generelated to Bacteria: genome-wide studiesMethods0.60section
Essential generelated to Bacteria: genome-wide studiesClones0.60section

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