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EcoRI

EcoRI (pronounced "eco R one") is a type II restriction enzyme isolated from Escherichia coli. It cleaves DNA double helices into fragments at specific sites, and is also a part of the restriction modification system. The enzyme's name originates from the species from which it was isolated: "E" denotes generic name (Escherichia), "co" denotes species…

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Key facts & relationships

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AlphaFold
IPR004221 · PF02963
Available protein structures:
IPR004221 · PF02963
CDD
79lll
InterPro
IPR004221
PDB
IPR004221 PF02963 (ECOD; PDBsum)
Pfam
PF02963

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Overview

History

Structure

Uses

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Map overview Semantic statistics

EcoRI

Nodes24
Edges23
Triples43
Avg. degree1.92
Density0.083333
Components1

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EcoRI

Top relations

related to External links · 10
EcoRI → Eco-RI, Medicine Medical Subject Headings, MeSH, National Library, Overview, P00642, PDB, PDBe-KB, Type-2, UniProt
related to Tertiary and quaternary structure · 8
EcoRI → Arg145, DNA, Each, Glu144, In, On, The, This
related to history · 7
EcoRI → Daisy Roulland-Dussoix, Herb Boyer, II, It, PhD, Robert Yoshimori, Yoshimori
related to Uses · 4
EcoRI → Conditions, DNA, One, Restriction
AlphaFold · 2
EcoRI → IPR004221, PF02963
Available protein structures: · 2
EcoRI → IPR004221, PF02963
related to Primary structure · 2
EcoRI → D/EXK, PD
see also · 2
EcoRI → EcoRII, EcoRV
CDD · 1
EcoRI → 79lll
InterPro · 1
EcoRI → IPR004221

Important terminology Word statistics

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Important terminology

enzyme restriction dna coli structure one used isolated first escherichia also crystal pdb enzymes subunit reaction type ii helices sites

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
EcoRIAlphaFoldIPR0042211.00infobox
EcoRIAlphaFoldPF029631.00infobox
EcoRIAvailable protein structures:IPR0042211.00infobox
EcoRIAvailable protein structures:PF029631.00infobox
EcoRICDD79lll1.00infobox
EcoRIInterProIPR0042211.00infobox
EcoRIPDBIPR004221 PF02963 (ECOD; PDBsum)1.00infobox
EcoRIPfamPF029631.00infobox
EcoRISCOP21na6 / SCOPe / SUPFAM1.00infobox
EcoRISymbolEcoRI1.00infobox
EcoRIrelated to External linksEco-RI0.60section
EcoRIrelated to External linksNational Library0.60section

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    Min side: 3
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