Research any topic before you write.

Find related topics. | Discover entities. | See connections. | Build a topical map.

ATRX: Clinical significance, Function & Interactions

Transcriptional regulator ATRX also known as ATP-dependent helicase ATRX, X-linked helicase II, or X-linked nuclear protein (XNP) is a protein that in humans is encoded by the ATRX gene.

Language: English [EN]
Use the mouse wheel or two fingers (on touchscreens) to zoom in and out of the map.
100%
More settings
100% 100% 100% 100% 100%

ATRX topic overview

The analysis highlights Clinical significance, Function and Interactions as prominent areas in the source structure around ATRX.

Related topics
22
Source areas
4
Connected nodes
26
Extracted relationships
149
Concept neighborhoods
8
Bridge connections
26

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Clinical significance · 10 topics
Function · 7 topics
Interactions · 3 topics
Overview · 2 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases
ATRX, ATR2, JMS, MRXHF1, RAD54, RAD54L, SFM1, SHS, XH2, XNP, ZNF-HX, MRX52, alpha thalassemia/mental retardation syndrome X-linked, chromatin remodeler, ATRX chromatin remodeler
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2JM1, 2LBM, 2LD1, 3QL9, 3QLA, 3QLC, 3QLN, 4W5A
Band
Xq21.1 · X D|X 47.26 cM
Bgee
endothelial cell · Achilles tendon · epithelium of colon · cerebellar vermis · Brodmann area 23
BioGPS
n/a
Chr.
X chromosome (human) · X chromosome (mouse)

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Function

Clinical significance

Interactions

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How ATRX connects Entity context

The extracted context around ATRX shows recurring relationship patterns in the source. For example, ATRX → ATP binding, cellular response to DNA damage stimulus, cellular response to hydroxyurea, chromatin binding, chromatin organization, chromatin remodeling, chromo shadow domain binding, chromosome, chromosome organization involved in meiotic cell cycle, DNA binding, DNA damage response, signal transduction by p53 class mediator, DNA duplex unwinding, DNA helicase activity, DNA methylation, DNA recombination, DNA repair, DNA translocase activity, DNA-binding transcription factor activity, RNA polymerase II-specific, forebrain development, helicase activity Another extracted example is ATRX → Achilles tendon, Brodmann area 23, cerebellar vermis, ciliary body, condyle, endothelial cell, Epithelium of choroid plexus, epithelium of colon, fossa, genital tubercle, Gonadal ridge, lobe of cerebellum, medullary collecting duct, pineal gland, pylorus, Region I of hippocampus proper, sural nerve, tail of embryo, tibia, vestibular sensory epithelium. Use these groups to spot repeated connection types before inspecting the individual relationships.

ATRX

Top relations

Gene ontology · 53
ATRX → ATP binding, cellular response to DNA damage stimulus, cellular response to hydroxyurea, chromatin binding, chromatin organization, chromatin remodeling, chromo shadow domain binding, chromosome, chromosome organization involved in meiotic cell cycle, DNA binding, DNA damage response, signal transduction by p53 class mediator, DNA duplex unwinding, DNA helicase activity, DNA methylation, DNA recombination, DNA repair, DNA translocase activity, DNA-binding transcription factor activity, RNA polymerase II-specific, forebrain development, helicase activity
Bgee · 20
ATRX → Achilles tendon, Brodmann area 23, cerebellar vermis, ciliary body, condyle, endothelial cell, Epithelium of choroid plexus, epithelium of colon, fossa, genital tubercle, Gonadal ridge, lobe of cerebellum, medullary collecting duct, pineal gland, pylorus, Region I of hippocampus proper, sural nerve, tail of embryo, tibia, vestibular sensory epithelium
RNA expression pattern · 20
ATRX → Achilles tendon, Brodmann area 23, cerebellar vermis, ciliary body, condyle, endothelial cell, Epithelium of choroid plexus, epithelium of colon, fossa, genital tubercle, Gonadal ridge, lobe of cerebellum, medullary collecting duct, pineal gland, pylorus, Region I of hippocampus proper, sural nerve, tail of embryo, tibia, vestibular sensory epithelium
related to External links · 11
ATRX → Alpha Thalassemia/Mental Retardation, Alpha-Thalassemia X-Linked Mental Retardation, ATRX Syndrome, GeneReviews/NCBI/NIH/UW, Human RAD54L, RAD54L, Syndrome, SyndromeHuman ATRX, UCSC Genome Browser, X-Linked, XLMR-Hypotonic Face SyndromeOMIM
related to Inherited mutations · 8
ATRX → ATR-X, DNA, Female, Inherited, Multiple, These, X-linked, XLMR
related to Function · 6
ATRX → ATPase, H3, In, SWI/SNF, These, Transcriptional
related to Somatic mutations · 5
ATRX → Acquired, ALT, Alternative Lengthening, Telomeres, There
related to Interactions · 3
ATRX → DAXX, EZH2, H3
Band · 2
ATRX → X D|X 47.26 cM, Xq21.1
Chr. · 2
ATRX → X chromosome (human), X chromosome (mouse)

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

gene human bp chromosome chr band location chromatin mutations x-linked helicase also nuclear protein mouse syndrome histone remodeling ucsc ii

ATRX relationships Subject–Predicate–Object triples

TTTA extracted 149 structured relationships around ATRX. Examples in this analysis include ATRX → Aliases → ATRX, ATR2, JMS, MRXHF1, RAD54, RAD54L, SFM1, SHS, XH2, XNP, ZNF-HX, MRX52, alpha thalassemia/mental retardation syndrome X-linked, chromatin remodeler, ATRX chromatin remodeler and ATRX → Available structures → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2JM1, 2LBM, 2LD1, 3QL9, 3QLA, 3QLC, 3QLN, 4W5A. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
ATRXAliasesATRX, ATR2, JMS, MRXHF1, RAD54, RAD54L, SFM1, SHS, XH2, XNP, ZNF-HX, MRX52, alpha thalassemia/mental retardation syndrome X-linked, chromatin remodeler, ATRX chromatin remodeler1.00infobox
ATRXAvailable structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2JM1, 2LBM, 2LD1, 3QL9, 3QLA, 3QLC, 3QLN, 4W5A1.00infobox
ATRXBandXq21.11.00infobox
ATRXBandX D|X 47.26 cM1.00infobox
ATRXBgeeendothelial cell1.00infobox
ATRXBgeeAchilles tendon1.00infobox
ATRXBgeeepithelium of colon1.00infobox
ATRXBgeecerebellar vermis1.00infobox
ATRXBgeeBrodmann area 231.00infobox
ATRXBgeeEpithelium of choroid plexus1.00infobox
ATRXBgeepylorus1.00infobox
ATRXBgeetibia1.00infobox
ATRXBgeesural nerve1.00infobox
ATRXBgeeRegion I of hippocampus proper1.00infobox
ATRXBgeegenital tubercle1.00infobox
ATRXBgeetail of embryo1.00infobox
ATRXBgeepineal gland1.00infobox
ATRXBgeemedullary collecting duct1.00infobox
ATRXBgeevestibular sensory epithelium1.00infobox
ATRXBgeecondyle1.00infobox
ATRXBgeefossa1.00infobox
ATRXBgeelobe of cerebellum1.00infobox
ATRXBgeeGonadal ridge1.00infobox
ATRXBgeeciliary body1.00infobox
ATRXBioGPSn/a1.00infobox
ATRXChr.X chromosome (human)1.00infobox
ATRXChr.X chromosome (mouse)1.00infobox
ATRXDatabasesNCBI: entry; OMA: entry1.00infobox
ATRXEnd77,786,233 bp1.00infobox
ATRXEnd104,973,009 bp1.00infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around ATRX bring nearby vocabulary together. In this analysis, examples include Gene, X-linked and Mutations. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • ATRX
    • Gene
    • X-linked
    • Mutations
    • Human
    • Also
    • Histone
    • Nuclear
    • Syndrome
    • Chromatin
    • Location
    • Entry
    • Function
  • atrx
    • Gene
    • X-linked
    • Mutations
    • Human
    • Also
    • Histone
    • Nuclear
    • Syndrome
    • Chromatin
    • Location
    • Entry
    • Function
  • gene
    • Location
    • Human
    • Chromatin
    • X-linked
    • Nuclear
    • Syndrome
    • Ucsc
    • Bp
    • Chr
    • Chromosome
    • Mutations
    • Helicase
  • helicase
    • Ii
    • Protein
    • Regulator
    • Transcriptional
    • Nuclear
    • End
    • Entry
    • Function
    • Mouse
    • Ncbi
    • Remodeling
    • Search
  • chromatin remodeling
    • Function
    • Remodeling
    • Search
    • Gene
    • Nuclear
    • Transcriptional
    • Bp
    • Chr
    • Chromosome
    • Location
    • Mutations
    • External
  • x chromosome inactivation
    • Bp
    • Band
    • Human
    • Location
    • End
    • Function
    • Mouse
    • Search
    • Gene
    • External
    • Entry
    • Helicase
  • function
    • Search
    • Chromatin
    • External
    • Bp
    • Chr
    • Chromosome
    • Location
    • End
    • Entry
    • Helicase
    • Ii
    • Inherited
  • protein
    • Regulator
    • Transcriptional
    • End
    • Entry
    • Function
    • Mouse
    • Ncbi
    • Remodeling
    • Search
    • Xnp
    • Histone
    • Ucsc

Connections between topic areas Semantic bridges

For ATRX, one of the stronger structural bridges in this analysis connects ATRX with Clinical significance. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
ATRXClinical significance · splits 16 ⟂ 11
ATRXFunction · splits 19 ⟂ 8
ATRXInteractions · splits 23 ⟂ 4
ATRXOverview · splits 24 ⟂ 3

Map overview Semantic statistics

ATRX

Nodes27
Edges26
Triples149
Avg. degree1.93
Density0.074074
Components1

Source & methodology

TTTA analyzes the structure around ATRX to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Clinical significance, Function & Interactions, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — ATRX · EN edition · Analysis: TopicsToTalkAbout

For writers, content strategists, SEOs, marketers and creators — from quick topic research to advanced semantic analysis.