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APOBEC1: Interactions & Overview

Apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 also known as C->U-editing enzyme APOBEC-1 is a protein that in humans is encoded by the APOBEC1 gene.

Language: English [EN]
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APOBEC1 topic overview

The analysis highlights Interactions and Overview as prominent areas in the source structure around APOBEC1.

Related topics
15
Source areas
2
Connected nodes
17
Extracted relationships
105
Concept neighborhoods
9
Bridge connections
17

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Overview · 11 topics
Interactions · 4 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

3.5.4.36
Aliases
APOBEC1, APOBEC-1, BEDP, CDAR1, HEPR, apolipoprotein B mRNA editing enzyme catalytic subunit 1
Band
12p13.31 · 6 F1|6 57.68 cM
Bgee
jejunal mucosa · duodenum · mucosa of ileum · testicle · mucosa of transverse colon
BioGPS
More reference expression data
Chr.
Chromosome 12 (human) · Chromosome 6 (mouse)

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Interactions

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How APOBEC1 connects Entity context

The extracted context around APOBEC1 shows recurring relationship patterns in the source. For example, APOBEC1 → catalytic activity, cellular response to insulin stimulus, cytidine deaminase activity, cytidine deamination, cytidine to uridine editing, cytoplasm, cytosine deaminase activity, defense response to virus, DNA cytosine deamination, DNA demethylation, enzyme activator activity, hydrolase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines, lipid metabolism, lipoprotein biosynthetic process, lipoprotein metabolic process, lipoprotein transport, metal ion binding, mRNA 3'-UTR AU-rich region binding, mRNA binding Another extracted example is APOBEC1 → blood, duodenum, gallbladder, gastric mucosa, granulocyte, Ileal epithelium, islet of Langerhans, jejunal mucosa, jejunum, left colon, mucosa of ileum, mucosa of transverse colon, mucous cell of stomach, muscle tissue, pyloric antrum, rectum, spleen, stroma of bone marrow, testicle. Use these groups to spot repeated connection types before inspecting the individual relationships.

APOBEC1

Top relations

Gene ontology · 42
APOBEC1 → catalytic activity, cellular response to insulin stimulus, cytidine deaminase activity, cytidine deamination, cytidine to uridine editing, cytoplasm, cytosine deaminase activity, defense response to virus, DNA cytosine deamination, DNA demethylation, enzyme activator activity, hydrolase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines, lipid metabolism, lipoprotein biosynthetic process, lipoprotein metabolic process, lipoprotein transport, metal ion binding, mRNA 3'-UTR AU-rich region binding, mRNA binding
Bgee · 19
APOBEC1 → blood, duodenum, gallbladder, gastric mucosa, granulocyte, Ileal epithelium, islet of Langerhans, jejunal mucosa, jejunum, left colon, mucosa of ileum, mucosa of transverse colon, mucous cell of stomach, muscle tissue, pyloric antrum, rectum, spleen, stroma of bone marrow, testicle
RNA expression pattern · 19
APOBEC1 → blood, duodenum, gallbladder, gastric mucosa, granulocyte, Ileal epithelium, islet of Langerhans, jejunal mucosa, jejunum, left colon, mucosa of ileum, mucosa of transverse colon, mucous cell of stomach, muscle tissue, pyloric antrum, rectum, spleen, stroma of bone marrow, testicle
Band · 2
APOBEC1 → 12p13.31, 6 F1|6 57.68 cM
Chr. · 2
APOBEC1 → Chromosome 12 (human), Chromosome 6 (mouse)
End · 2
APOBEC1 → 122,579,403 bp, 7,665,908 bp
related to External links · 2
APOBEC1 → Human APOBEC1, UCSC Genome Browser
3.5.4.36 · 1
APOBEC1 → ↗
Aliases · 1
APOBEC1 → APOBEC1, APOBEC-1, BEDP, CDAR1, HEPR, apolipoprotein B mRNA editing enzyme catalytic subunit 1
BioGPS · 1
APOBEC1 → More reference expression data

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

a1 editing mrna human gene deamination protein enzyme cytosine bp apolipoprotein chromosome 12 chr band function expressed activity humans stop

APOBEC1 relationships Subject–Predicate–Object triples

TTTA extracted 105 structured relationships around APOBEC1. Examples in this analysis include APOBEC1 → 3.5.4.36 → ↗ and APOBEC1 → Aliases → APOBEC1, APOBEC-1, BEDP, CDAR1, HEPR, apolipoprotein B mRNA editing enzyme catalytic subunit 1. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
APOBEC13.5.4.361.00infobox
APOBEC1AliasesAPOBEC1, APOBEC-1, BEDP, CDAR1, HEPR, apolipoprotein B mRNA editing enzyme catalytic subunit 11.00infobox
APOBEC1Band12p13.311.00infobox
APOBEC1Band6 F1|6 57.68 cM1.00infobox
APOBEC1Bgeejejunal mucosa1.00infobox
APOBEC1Bgeeduodenum1.00infobox
APOBEC1Bgeemucosa of ileum1.00infobox
APOBEC1Bgeetesticle1.00infobox
APOBEC1Bgeemucosa of transverse colon1.00infobox
APOBEC1Bgeegastric mucosa1.00infobox
APOBEC1Bgeeislet of Langerhans1.00infobox
APOBEC1Bgeerectum1.00infobox
APOBEC1Bgeegallbladder1.00infobox
APOBEC1Bgeemuscle tissue1.00infobox
APOBEC1Bgeegranulocyte1.00infobox
APOBEC1Bgeestroma of bone marrow1.00infobox
APOBEC1Bgeepyloric antrum1.00infobox
APOBEC1BgeeIleal epithelium1.00infobox
APOBEC1Bgeeleft colon1.00infobox
APOBEC1Bgeespleen1.00infobox
APOBEC1Bgeejejunum1.00infobox
APOBEC1Bgeeblood1.00infobox
APOBEC1Bgeemucous cell of stomach1.00infobox
APOBEC1BioGPSMore reference expression data1.00infobox
APOBEC1Chr.Chromosome 12 (human)1.00infobox
APOBEC1Chr.Chromosome 6 (mouse)1.00infobox
APOBEC1DatabasesNCBI: entry; OMA: entry1.00infobox
APOBEC1End7,665,908 bp1.00infobox
APOBEC1End122,579,403 bp1.00infobox
APOBEC1EnsemblENSG000001117011.00infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around APOBEC1 bring nearby vocabulary together. In this analysis, examples include Catalytic, Gene and Location. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • APOBEC1
    • Catalytic
    • Gene
    • Location
    • Apolipoprotein
    • Chromosome
    • Protein
    • Encoded
    • Enzyme
    • Editing
    • Human
    • Modification
    • Mrna
  • apobec1
    • Catalytic
    • Gene
    • Location
    • Apolipoprotein
    • Chromosome
    • Protein
    • Encoded
    • Enzyme
    • Editing
    • Human
    • Modification
    • Mrna
  • apolipoprotein b
    • Apobec1
    • Gene
    • Also
    • Apobec-1
    • Catalytic
    • Location
    • Mrna
    • Chromosome
    • Function
    • Editing
    • Enzyme
    • Human
  • mrna
    • Codon
    • Stop
    • Activity
    • Function
    • Protein
    • Cytosine
    • Gene
    • Deamination
    • Human
    • Apob
    • Lipid
    • Location
  • cytosine
    • Deamination
    • Mrna
    • Stop
    • Acid
    • Band
    • Dna
    • Lipid
    • Location
    • Modification
    • Rna
    • Activity
    • Bp
  • gene
    • Location
    • Chromosome
    • Human
    • Bp
    • Chr
    • Protein
    • Band
    • Modification
    • Mrna
    • Activity
    • Function
    • Deamination
  • protein
    • Rna
    • Holoenzyme
    • Band
    • Codon
    • Dna
    • Lipid
    • Location
    • Modification
    • Stop
    • Activity
    • Bp
    • Chr
  • apobec protein family
    • Rna
    • Holoenzyme
    • Band
    • Codon
    • Dna
    • Lipid
    • Location
    • Modification
    • Stop
    • Activity
    • Bp
    • Chr

Connections between topic areas Semantic bridges

For APOBEC1, one of the stronger structural bridges in this analysis connects APOBEC1 with Overview. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
APOBEC1Overview · splits 6 ⟂ 12
APOBEC1Interactions · splits 13 ⟂ 5

Map overview Semantic statistics

APOBEC1

Nodes18
Edges17
Triples105
Avg. degree1.89
Density0.111111
Components1

Source & methodology

TTTA analyzes the structure around APOBEC1 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Interactions & Overview, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — APOBEC1 · EN edition · Analysis: TopicsToTalkAbout

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