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APOBEC

APOBEC ("apolipoprotein B mRNA editing enzyme, catalytic polypeptide") is a family of evolutionarily conserved cytidine deaminases.

Members, Family members & Function

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Family members

11 related topics

Function

6 related topics

Structure

1 related topics

Overview

1 related topics

Key facts & relationships

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AlphaFold
IPR013158 · PF08210
Available protein structures:
IPR013158 · PF08210
InterPro
IPR013158
PDB
IPR013158 PF08210 (ECOD; PDBsum)
Pfam
PF08210
Symbol
APOBEC_N

Topics to explore

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Overview

Function

Structure

Family members

Bibliography

Advanced semantic analysis

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Map overview Semantic statistics

APOBEC

Nodes28
Edges27
Triples43
Avg. degree1.93
Density0.071429
Components1

How this topic connects Entity context

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APOBEC

Top relations

related to Function · 17
APOBEC → APOBEC-1, APOBEC-like, APOBEC-modified, C-terminal, CAA, CGA, For, In, More, NF1, RNA, RNA-binding, The, The APOBEC, The N-terminal, UAA, UGA
related to Bibliography · 6
APOBEC → APOBEC3, April, Gazzo, Gupta, Nature Genetics, Selenica
related to Family members · 5
APOBEC → AID, APOBEC1APOBEC2APOBEC3AAPOBEC3BAPOBEC3CAPOBEC3D, APOBEC3E, APOBEC3FAPOBEC3GAPOBEC3HAPOBEC4Activation-induced, Human
related to Cancer · 3
APOBEC → These, This, When
related to Structure · 3
APOBEC → APOBEC3, APOBEC3G's, Many
AlphaFold · 2
APOBEC → IPR013158, PF08210
Available protein structures: · 2
APOBEC → IPR013158, PF08210
InterPro · 1
APOBEC → IPR013158
PDB · 1
APOBEC → IPR013158 PF08210 (ECOD; PDBsum)
Pfam · 1
APOBEC → PF08210

Important terminology Word statistics

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Important terminology

proteins mrna family catalytic cytidine editing cancer protein domain apolipoprotein structure members modifications zinc deaminase deamination rna apobec-1 intestinal interacts

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
APOBECAlphaFoldIPR0131581.00infobox
APOBECAlphaFoldPF082101.00infobox
APOBECAvailable protein structures:IPR0131581.00infobox
APOBECAvailable protein structures:PF082101.00infobox
APOBECInterProIPR0131581.00infobox
APOBECPDBIPR013158 PF08210 (ECOD; PDBsum)1.00infobox
APOBECPfamPF082101.00infobox
APOBECSymbolAPOBEC_N1.00infobox
in the site-specific deamination of a CGA to a UGA stop codon in neurofibromatosis type 1instance ofFor other APOBEC-modified transcripts0.80text
APOBECrelated to BibliographyGupta0.60section
APOBECrelated to BibliographyGazzo0.60section
APOBECrelated to BibliographySelenica0.60section

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    Min side: 3
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