XRN1

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Explore the main themes, entities and connections around XRN1. Start with the topic map, then use the sections below for research and deeper semantic analysis.

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Function

Exonuclease Histone MRNA MRNA-decapping Transcription

13 related topics

Overview

Protein Gene Hydrolyses RNA Direction

5 related topics

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases: XRN1, SEP1, 5'-3' exoribonuclease 1, Xrn1
Band: 3q23 · 9|9 E3.3
Bgee: pancreatic epithelial cell · Achilles tendon · germinal epithelium · visceral pleura · parietal pleura
BioGPS: n/a
Chr.: Chromosome 3 (human) · Chromosome 9 (mouse)
Databases: NCBI: entry; OMA: entry

Topics to explore

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Overview

Protein
Gene
Hydrolyses Hydrolysis
RNA
Direction Directionality (molecular biology)

Function

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

Map overview Semantic statistics

Nodes21

Edges20

Triples92

Avg. degree1.9

Density0.095238

Components1

How this topic connects Entity context

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XRN1

Top relations

Gene ontology · 32

XRN1 → 5'-3' exonuclease activity, 5'-3' exoribonuclease activity, cellular response to cycloheximide, cellular response to puromycin, cytoplasm, cytosol, dendrite, DNA binding, exonuclease activity, G-quadruplex DNA binding, G-quadruplex RNA binding, histone mRNA catabolic process, hydrolase activity, membrane, negative regulation of telomere maintenance via telomerase, negative regulation of translation, nuclear mRNA surveillance, nuclear-transcribed mRNA catabolic process, nuclease activity, nucleic acid binding

Bgee · 20

XRN1 → Achilles tendon, bone marrow cell, cumulus cell, endothelial cell, genital tubercle, germinal epithelium, gingival epithelium, granulocyte, palpebral conjunctiva, pancreatic epithelial cell, parietal pleura, pineal gland, Rostral migratory stream, secondary oocyte, tail of embryo, thymus, tibia, vas deferens, visceral pleura, zygote

RNA expression pattern · 20

Band · 2

XRN1 → 3q23, 9|9 E3.3

Chr. · 2

XRN1 → Chromosome 3 (human), Chromosome 9 (mouse)

End · 2

XRN1 → 142,448,062 bp, 95,939,856 bp

Aliases · 1

XRN1 → XRN1, SEP1, 5'-3' exoribonuclease 1, Xrn1

BioGPS · 1

XRN1 → n/a

Databases · 1

XRN1 → NCBI: entry; OMA: entry

Ensembl · 1

XRN1 → ENSG00000114127

Important terminology Word statistics

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

bp gene chr human band protein chromosome exoribonuclease location mrna encoded rna mouse function -3 5'-3' 448 062 end 142

Entity relationships Subject–Predicate–Object triples

Subject	Predicate	Object	Confidence	Src
XRN1	Aliases	XRN1, SEP1, 5'-3' exoribonuclease 1, Xrn1	1.00	infobox
XRN1	Band	3q23	1.00	infobox
XRN1	Band	9\|9 E3.3	1.00	infobox
XRN1	Bgee	pancreatic epithelial cell	1.00	infobox
XRN1	Bgee	Achilles tendon	1.00	infobox
XRN1	Bgee	germinal epithelium	1.00	infobox
XRN1	Bgee	visceral pleura	1.00	infobox
XRN1	Bgee	parietal pleura	1.00	infobox
XRN1	Bgee	tibia	1.00	infobox
XRN1	Bgee	bone marrow cell	1.00	infobox
XRN1	Bgee	gingival epithelium	1.00	infobox
XRN1	Bgee	endothelial cell	1.00	infobox
XRN1	Bgee	palpebral conjunctiva	1.00	infobox
XRN1	Bgee	tail of embryo	1.00	infobox
XRN1	Bgee	cumulus cell	1.00	infobox
XRN1	Bgee	Rostral migratory stream	1.00	infobox
XRN1	Bgee	thymus	1.00	infobox
XRN1	Bgee	genital tubercle	1.00	infobox
XRN1	Bgee	zygote	1.00	infobox
XRN1	Bgee	pineal gland	1.00	infobox
XRN1	Bgee	secondary oocyte	1.00	infobox
XRN1	Bgee	vas deferens	1.00	infobox
XRN1	Bgee	granulocyte	1.00	infobox
XRN1	BioGPS	n/a	1.00	infobox
XRN1	Chr.	Chromosome 3 (human)	1.00	infobox
XRN1	Chr.	Chromosome 9 (mouse)	1.00	infobox
XRN1	Databases	NCBI: entry; OMA: entry	1.00	infobox
XRN1	End	142,448,062 bp	1.00	infobox
XRN1	End	95,939,856 bp	1.00	infobox
XRN1	Ensembl	ENSG00000114127	1.00	infobox

Related concept clusters Concept neighborhoods

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Connections between topic areas Semantic bridges

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