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VPS24: Interactions & Overview

Charged multivesicular body protein 3 is a protein that in humans is encoded by the VPS24 gene.

Language: English [EN]
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VPS24 topic overview

The analysis highlights Interactions and Overview as prominent areas in the source structure around VPS24.

Related topics
4
Source areas
2
Connected nodes
6
Extracted relationships
107
Related term clusters
5
Bridge connections
6

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Interactions · 2 topics
Overview · 2 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases
CHMP3, NEDF, VPS24, CGI-149, charged multivesicular body protein 3
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2XZE, 3FRT, 3FRV, 2GD5
Band
2p11.2 · 6 C1|6 32.17 cM
Bgee
Achilles tendon · secondary oocyte · cerebellar vermis · nipple · skin of hip
BioGPS
More reference expression data
Chr.
Chromosome 2 (human) · Chromosome 6 (mouse)

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VPS24
4Protein · Gene · Protein-protein interaction

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Interactions

For the semantics nerds

You can skip this section if you’re here for content ideas and keyword inspiration.

Advanced semantic analysis

How VPS24 connects Entity context

The extracted context around VPS24 shows recurring relationship patterns in the source. For example, VPS24 → apoptotic process, autophagosome maturation, cell cycle, cell division, cytoplasm, cytoplasmic vesicle, cytosol, endosomal transport, endosome, endosome transport via multivesicular body sorting pathway, ESCRT III complex, extracellular exosome, identical protein binding, intracellular anatomical structure, late endosome, late endosome membrane, late endosome to vacuole transport, macroautophagy, membrane, midbody abscission Another extracted example is VPS24 → Achilles tendon, cerebellar vermis, dentate gyrus of hippocampal formation granule cell, esophagus, granulocyte, lip, muscle of thigh, neural layer of retina, nipple, parotid gland, rectum, right kidney, saphenous vein, secondary oocyte, seminal vesicula, skin of hip, spermatocyte, superior frontal gyrus, trabecular bone, urethra. Use these groups to spot repeated connection types before inspecting the individual relationships.

VPS24

Top relations

Gene ontology · 43
VPS24 → apoptotic process, autophagosome maturation, cell cycle, cell division, cytoplasm, cytoplasmic vesicle, cytosol, endosomal transport, endosome, endosome transport via multivesicular body sorting pathway, ESCRT III complex, extracellular exosome, identical protein binding, intracellular anatomical structure, late endosome, late endosome membrane, late endosome to vacuole transport, macroautophagy, membrane, midbody abscission
Bgee · 20
VPS24 → Achilles tendon, cerebellar vermis, dentate gyrus of hippocampal formation granule cell, esophagus, granulocyte, lip, muscle of thigh, neural layer of retina, nipple, parotid gland, rectum, right kidney, saphenous vein, secondary oocyte, seminal vesicula, skin of hip, spermatocyte, superior frontal gyrus, trabecular bone, urethra
RNA expression pattern · 20
VPS24 → Achilles tendon, cerebellar vermis, dentate gyrus of hippocampal formation granule cell, esophagus, granulocyte, lip, muscle of thigh, neural layer of retina, nipple, parotid gland, rectum, right kidney, saphenous vein, secondary oocyte, seminal vesicula, skin of hip, spermatocyte, superior frontal gyrus, trabecular bone, urethra
Band · 2
VPS24 → 2p11.2, 6 C1|6 32.17 cM
Chr. · 2
VPS24 → Chromosome 2 (human), Chromosome 6 (mouse)
End · 2
VPS24 → 71,559,593 bp, 86,563,479 bp
Aliases · 1
VPS24 → CHMP3, NEDF, VPS24, CGI-149, charged multivesicular body protein 3
Available structures · 1
VPS24 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2XZE, 3FRT, 3FRV, 2GD5
BioGPS · 1
VPS24 → More reference expression data
Databases · 1
VPS24 → NCBI: entry; OMA: entry

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

bp protein gene chr human band multivesicular body chromosome location chmp3 mouse sorting charged function search 563 479 end 86

VPS24 relationships Subject–Predicate–Object triples

TTTA extracted 107 structured relationships around VPS24. Examples in this analysis include VPS24 → Aliases → CHMP3, NEDF, VPS24, CGI-149, charged multivesicular body protein 3 and VPS24 → Available structures → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2XZE, 3FRT, 3FRV, 2GD5. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
VPS24AliasesCHMP3, NEDF, VPS24, CGI-149, charged multivesicular body protein 31.00infobox
VPS24Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2XZE, 3FRT, 3FRV, 2GD51.00infobox
VPS24Band2p11.21.00infobox
VPS24Band6 C1|6 32.17 cM1.00infobox
VPS24BgeeAchilles tendon1.00infobox
VPS24Bgeesecondary oocyte1.00infobox
VPS24Bgeecerebellar vermis1.00infobox
VPS24Bgeenipple1.00infobox
VPS24Bgeeskin of hip1.00infobox
VPS24Bgeeurethra1.00infobox
VPS24Bgeesaphenous vein1.00infobox
VPS24Bgeeparotid gland1.00infobox
VPS24Bgeerectum1.00infobox
VPS24Bgeetrabecular bone1.00infobox
VPS24Bgeegranulocyte1.00infobox
VPS24Bgeedentate gyrus of hippocampal formation granule cell1.00infobox
VPS24Bgeeseminal vesicula1.00infobox
VPS24Bgeeneural layer of retina1.00infobox
VPS24Bgeesuperior frontal gyrus1.00infobox
VPS24Bgeeright kidney1.00infobox
VPS24Bgeespermatocyte1.00infobox
VPS24Bgeelip1.00infobox
VPS24Bgeemuscle of thigh1.00infobox
VPS24Bgeeesophagus1.00infobox
VPS24BioGPSMore reference expression data1.00infobox
VPS24Chr.Chromosome 2 (human)1.00infobox
VPS24Chr.Chromosome 6 (mouse)1.00infobox
VPS24DatabasesNCBI: entry; OMA: entry1.00infobox
VPS24End86,563,479 bp1.00infobox
VPS24End71,559,593 bp1.00infobox

Related concept clusters Related term clusters

The concept neighborhoods around VPS24 bring nearby vocabulary together. In this analysis, examples include Charged, Body and Multivesicular. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • protein
    • Chmp3
    • Complex
    • Endosomal
    • Function
    • Membrane
    • Mvb
    • Proteins
    • Search
    • Sorting
    • Location
    • Vps24
    • Chromosome
  • gene
    • Location
    • Multivesicular
    • Chromosome
    • Human
    • Bp
    • C1
    • Chmp3
    • Chr
    • End
    • Function
    • Mouse
    • Protein
  • VPS24
    • Charged
    • Body
    • Multivesicular
    • Gene
    • Encoded
    • Humans
    • Interactions
    • Protein
    • Reading
    • References
    • Chmp3
    • Function
  • vps24
    • Charged
    • Body
    • Multivesicular
    • Gene
    • Encoded
    • Humans
    • Interactions
    • Protein
    • Reading
    • References
    • Chmp3
    • Function
  • interactions
    • Reading
    • References
    • Search
    • Location
    • Multivesicular
    • Vps24
    • Human
    • Protein

Connections between topic areas Semantic bridges

For VPS24, one of the stronger structural bridges in this analysis connects VPS24 with Overview. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
VPS24 — Overview · splits 4 ⟂ 3
VPS24 — Interactions · splits 4 ⟂ 3

Map overview Semantic statistics

VPS24

Nodes7
Edges6
Triples107
Avg. degree1.71
Density0.285714
Components1

Source & methodology

TTTA analyzes the structure around VPS24 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Interactions & Overview, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — VPS24 · EN edition · Analysis: TopicsToTalkAbout

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