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SUMO3: Function, Interactions & Overview

Small ubiquitin-related modifier 3 is a protein that in humans is encoded by the SUMO3 gene.

Language: English [EN]
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SUMO3 topic overview

The analysis highlights Function, Interactions and Overview as prominent areas in the source structure around SUMO3.

Related topics
10
Source areas
3
Connected nodes
13
Extracted relationships
82
Concept neighborhoods
9
Bridge connections
13

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Function · 5 topics
Interactions · 3 topics
Overview · 2 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases
SUMO3, SMT3A, SMT3H1, SUMO-3, Smt3B, small ubiquitin-like modifier 3, small ubiquitin like modifier 3
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1U4A, 2IO1, 2MP2
Band
21q22.3 · 10 C1|10 39.72 cM
Bgee
endothelial cell · tibia · parietal pleura · visceral pleura · palpebral conjunctiva
BioGPS
More reference expression data
Chr.
Chromosome 21 (human) · Chromosome 10 (mouse)

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Function

Interactions

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How SUMO3 connects Entity context

The extracted context around SUMO3 shows recurring relationship patterns in the source. For example, SUMO3 → Brodmann area 23, cerebellum, dentate gyrus of hippocampal formation granule cell, endothelial cell, epiblast, germinal epithelium, hair follicle, mesencephalon, middle temporal gyrus, neural layer of retina, olfactory bulb, palpebral conjunctiva, parietal pleura, retinal pigment epithelium, rhombencephalon, stomach, striatum of neuraxis, tibia, visceral pleura, yolk sac Another extracted example is SUMO3 → cytoplasm, enzyme binding, kinetochore, negative regulation of DNA binding, nucleoplasm, nucleus, PML body, protein binding, protein sumoylation, protein tag, ubiquitin-like protein ligase binding. Use these groups to spot repeated connection types before inspecting the individual relationships.

SUMO3

Top relations

Bgee · 20
SUMO3 → Brodmann area 23, cerebellum, dentate gyrus of hippocampal formation granule cell, endothelial cell, epiblast, germinal epithelium, hair follicle, mesencephalon, middle temporal gyrus, neural layer of retina, olfactory bulb, palpebral conjunctiva, parietal pleura, retinal pigment epithelium, rhombencephalon, stomach, striatum of neuraxis, tibia, visceral pleura, yolk sac
RNA expression pattern · 20
SUMO3 → Brodmann area 23, cerebellum, dentate gyrus of hippocampal formation granule cell, endothelial cell, epiblast, germinal epithelium, hair follicle, mesencephalon, middle temporal gyrus, neural layer of retina, olfactory bulb, palpebral conjunctiva, parietal pleura, retinal pigment epithelium, rhombencephalon, stomach, striatum of neuraxis, tibia, visceral pleura, yolk sac
Gene ontology · 11
SUMO3 → cytoplasm, enzyme binding, kinetochore, negative regulation of DNA binding, nucleoplasm, nucleus, PML body, protein binding, protein sumoylation, protein tag, ubiquitin-like protein ligase binding
related to Function · 6
SUMO3 → However, Li, MIM, OMIM, Su, SUMO
Band · 2
SUMO3 → 10 C1|10 39.72 cM, 21q22.3
Chr. · 2
SUMO3 → Chromosome 10 (mouse), Chromosome 21 (human)
End · 2
SUMO3 → 44,818,779 bp, 77,454,165 bp
related to Interactions · 2
SUMO3 → ARNTL, Thymine-DNA
Aliases · 1
SUMO3 → SUMO3, SMT3A, SMT3H1, SUMO-3, Smt3B, small ubiquitin-like modifier 3, small ubiquitin like modifier 3
Available structures · 1
SUMO3 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1U4A, 2IO1, 2MP2

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

bp chr human band gene chromosome 21 protein location function mouse cellular small modifier ubiquitin-like search 818 779 end 44

SUMO3 relationships Subject–Predicate–Object triples

TTTA extracted 82 structured relationships around SUMO3. Examples in this analysis include SUMO3 → Aliases → SUMO3, SMT3A, SMT3H1, SUMO-3, Smt3B, small ubiquitin-like modifier 3, small ubiquitin like modifier 3 and SUMO3 → Available structures → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1U4A, 2IO1, 2MP2. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
SUMO3AliasesSUMO3, SMT3A, SMT3H1, SUMO-3, Smt3B, small ubiquitin-like modifier 3, small ubiquitin like modifier 31.00infobox
SUMO3Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1U4A, 2IO1, 2MP21.00infobox
SUMO3Band21q22.31.00infobox
SUMO3Band10 C1|10 39.72 cM1.00infobox
SUMO3Bgeeendothelial cell1.00infobox
SUMO3Bgeetibia1.00infobox
SUMO3Bgeeparietal pleura1.00infobox
SUMO3Bgeevisceral pleura1.00infobox
SUMO3Bgeepalpebral conjunctiva1.00infobox
SUMO3Bgeegerminal epithelium1.00infobox
SUMO3Bgeemiddle temporal gyrus1.00infobox
SUMO3Bgeeretinal pigment epithelium1.00infobox
SUMO3BgeeBrodmann area 231.00infobox
SUMO3Bgeehair follicle1.00infobox
SUMO3Bgeeyolk sac1.00infobox
SUMO3Bgeeneural layer of retina1.00infobox
SUMO3Bgeeolfactory bulb1.00infobox
SUMO3Bgeestriatum of neuraxis1.00infobox
SUMO3Bgeemesencephalon1.00infobox
SUMO3Bgeeepiblast1.00infobox
SUMO3Bgeedentate gyrus of hippocampal formation granule cell1.00infobox
SUMO3Bgeerhombencephalon1.00infobox
SUMO3Bgeestomach1.00infobox
SUMO3Bgeecerebellum1.00infobox
SUMO3BioGPSMore reference expression data1.00infobox
SUMO3Chr.Chromosome 21 (human)1.00infobox
SUMO3Chr.Chromosome 10 (mouse)1.00infobox
SUMO3DatabasesNCBI: entry; OMA: entry1.00infobox
SUMO3End44,818,779 bp1.00infobox
SUMO3End77,454,165 bp1.00infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around SUMO3 bring nearby vocabulary together. In this analysis, examples include Cellular, Function and Omim. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • protein
    • Sumo3
    • Cellular
    • Proteins
    • Regulation
    • Sumoylation
    • Gene
    • Encoded
    • Humans
    • Ubiquitin-related
    • C1
    • End
    • Function
  • gene
    • Location
    • Chromosome
    • Human
    • Sumo3
    • Bp
    • C1
    • Chr
    • End
    • Function
    • Modifier
    • Mouse
    • Search
  • function
    • Search
    • Ubiquitin
    • Ubiquitin-like
    • Location
    • Chromosome
    • Gene
    • Human
    • Interactions
    • Reading
    • References
    • Sumo3
    • Bp
  • SUMO3
    • Cellular
    • Function
    • Omim
    • Proteins
    • Regulation
    • Search
    • Sumoylation
    • Ubiquitin
    • Ubiquitin-like
    • Location
    • Chromosome
    • Human
  • sumo3
    • Cellular
    • Function
    • Omim
    • Proteins
    • Regulation
    • Search
    • Sumoylation
    • Ubiquitin
    • Ubiquitin-like
    • Location
    • Chromosome
    • Human
  • interactions
    • Reading
    • References
    • Modifier
    • Omim
    • Search
    • Small
    • Ubiquitin
    • Ubiquitin-like
    • Location
    • Human
    • Sumo3
  • ubiquitin
    • Ubiquitin-like
    • C1
    • Cellular
    • End
    • Mouse
    • Proteins
    • Regulation
    • Sumoylation
    • Band
  • sumo proteins
    • Regulation
    • Sumoylation
    • Sumo3
    • Search
    • Ubiquitin
    • Ubiquitin-like

Connections between topic areas Semantic bridges

For SUMO3, one of the stronger structural bridges in this analysis connects SUMO3 with Function. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
SUMO3Function · splits 8 ⟂ 6
SUMO3Interactions · splits 10 ⟂ 4
SUMO3Overview · splits 11 ⟂ 3

Map overview Semantic statistics

SUMO3

Nodes14
Edges13
Triples82
Avg. degree1.86
Density0.142857
Components1

Source & methodology

TTTA analyzes the structure around SUMO3 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Function, Interactions & Overview, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — SUMO3 · EN edition · Analysis: TopicsToTalkAbout

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