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SMURF2: Interactions & Overview

E3 ubiquitin-protein ligase SMURF2 is an enzyme that in humans is encoded by the SMURF2 gene which is located at chromosome 17q23.3-q24.1.

Language: English [EN]
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SMURF2 topic overview

The analysis highlights Interactions and Overview as prominent areas in the source structure around SMURF2.

Related topics
11
Source areas
2
Connected nodes
13
Extracted relationships
99
Concept neighborhoods
6
Bridge connections
13

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Interactions · 9 topics
Overview · 2 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

2.3.2.26
Aliases
SMURF2, SMAD specific E3 ubiquitin protein ligase 2
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1ZVD, 2DJY, 2JQZ, 2KXQ, 2LTZ
Band
17q23.3-q24.1 · 11|11 E1
Bgee
buccal mucosa cell · secondary oocyte · amniotic fluid · pylorus · saphenous vein
BioGPS
More reference expression data

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Interactions

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How SMURF2 connects Entity context

The extracted context around SMURF2 shows recurring relationship patterns in the source. For example, SMURF2 → BMP signaling pathway, cytoplasm, cytosol, identical protein binding, membrane, membrane raft, negative regulation of BMP signaling pathway, negative regulation of transcription by RNA polymerase II, negative regulation of transcription, DNA-templated, negative regulation of transforming growth factor beta receptor signaling pathway, nuclear speck, nucleoplasm, nucleus, plasma membrane, positive regulation of canonical Wnt signaling pathway, positive regulation of protein catabolic process, positive regulation of trophoblast cell migration, proteasome-mediated ubiquitin-dependent protein catabolic process, protein binding, protein deubiquitination Another extracted example is SMURF2 → Achilles tendon, amniotic fluid, buccal mucosa cell, caput epididymis, endothelial cell of lymphatic vessel, genital tubercle, hand, lactiferous duct, left lung lobe, otolith organ, pericardium, pylorus, right lung lobe, saphenous vein, secondary oocyte, superior cervical ganglion, utricle, visceral pleura, zygote. Use these groups to spot repeated connection types before inspecting the individual relationships.

SMURF2

Top relations

Gene ontology · 32
SMURF2 → BMP signaling pathway, cytoplasm, cytosol, identical protein binding, membrane, membrane raft, negative regulation of BMP signaling pathway, negative regulation of transcription by RNA polymerase II, negative regulation of transcription, DNA-templated, negative regulation of transforming growth factor beta receptor signaling pathway, nuclear speck, nucleoplasm, nucleus, plasma membrane, positive regulation of canonical Wnt signaling pathway, positive regulation of protein catabolic process, positive regulation of trophoblast cell migration, proteasome-mediated ubiquitin-dependent protein catabolic process, protein binding, protein deubiquitination
Bgee · 19
SMURF2 → Achilles tendon, amniotic fluid, buccal mucosa cell, caput epididymis, endothelial cell of lymphatic vessel, genital tubercle, hand, lactiferous duct, left lung lobe, otolith organ, pericardium, pylorus, right lung lobe, saphenous vein, secondary oocyte, superior cervical ganglion, utricle, visceral pleura, zygote
RNA expression pattern · 19
SMURF2 → Achilles tendon, amniotic fluid, buccal mucosa cell, caput epididymis, endothelial cell of lymphatic vessel, genital tubercle, hand, lactiferous duct, left lung lobe, otolith organ, pericardium, pylorus, right lung lobe, saphenous vein, secondary oocyte, superior cervical ganglion, utricle, visceral pleura, zygote
related to Interactions · 3
SMURF2 → Mothers, SCYE1, SMURF1
Band · 2
SMURF2 → 11|11 E1, 17q23.3-q24.1
Chr. · 2
SMURF2 → Chromosome 11 (mouse), Chromosome 17 (human)
End · 2
SMURF2 → 106,811,541 bp, 64,662,307 bp
2.3.2.26 · 1
SMURF2 → ↗
Aliases · 1
SMURF2 → SMURF2, SMAD specific E3 ubiquitin protein ligase 2
Available structures · 1
SMURF2 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1ZVD, 2DJY, 2JQZ, 2KXQ, 2LTZ

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

bp chromosome chr human band gene 17 ligase 3-q24 location ubiquitin enzyme mouse e3 ubiquitin-protein 17q23 smad protein search activity

SMURF2 relationships Subject–Predicate–Object triples

TTTA extracted 99 structured relationships around SMURF2. Examples in this analysis include SMURF2 → 2.3.2.26 → ↗ and SMURF2 → Aliases → SMURF2, SMAD specific E3 ubiquitin protein ligase 2. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
SMURF22.3.2.261.00infobox
SMURF2AliasesSMURF2, SMAD specific E3 ubiquitin protein ligase 21.00infobox
SMURF2Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1ZVD, 2DJY, 2JQZ, 2KXQ, 2LTZ1.00infobox
SMURF2Band17q23.3-q24.11.00infobox
SMURF2Band11|11 E11.00infobox
SMURF2Bgeebuccal mucosa cell1.00infobox
SMURF2Bgeesecondary oocyte1.00infobox
SMURF2Bgeeamniotic fluid1.00infobox
SMURF2Bgeepylorus1.00infobox
SMURF2Bgeesaphenous vein1.00infobox
SMURF2Bgeelactiferous duct1.00infobox
SMURF2Bgeevisceral pleura1.00infobox
SMURF2Bgeepericardium1.00infobox
SMURF2Bgeecaput epididymis1.00infobox
SMURF2BgeeAchilles tendon1.00infobox
SMURF2Bgeehand1.00infobox
SMURF2Bgeeotolith organ1.00infobox
SMURF2Bgeeutricle1.00infobox
SMURF2Bgeezygote1.00infobox
SMURF2Bgeeleft lung lobe1.00infobox
SMURF2Bgeeright lung lobe1.00infobox
SMURF2Bgeeendothelial cell of lymphatic vessel1.00infobox
SMURF2Bgeegenital tubercle1.00infobox
SMURF2Bgeesuperior cervical ganglion1.00infobox
SMURF2BioGPSMore reference expression data1.00infobox
SMURF2Chr.Chromosome 17 (human)1.00infobox
SMURF2Chr.Chromosome 11 (mouse)1.00infobox
SMURF2DatabasesNCBI: entry; OMA: entry1.00infobox
SMURF2End64,662,307 bp1.00infobox
SMURF2End106,811,541 bp1.00infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around SMURF2 bring nearby vocabulary together. In this analysis, examples include Gene, Activity and Enzyme. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • SMURF2
    • Gene
    • Activity
    • Enzyme
    • Protein
    • Search
    • Smad
    • Ubiquitin
    • Ubiquitin-protein
    • Location
    • Human
    • Bp
    • Chr
  • smurf2
    • Gene
    • Activity
    • Enzyme
    • Protein
    • Search
    • Smad
    • Ubiquitin
    • Ubiquitin-protein
    • Location
    • Human
    • Bp
    • Chr
  • gene
    • Ligase
    • Location
    • Smurf2
    • Human
    • Activity
    • Bp
    • Chr
    • End
    • Mouse
    • Protein
    • Search
    • Smad
  • enzyme
    • Ligase
    • Smurf2
    • Encoded
    • Gene
    • Humans
    • Interactions
    • Located
    • Reading
    • References
    • Activity
    • Protein
    • Search
  • interactions
    • Reading
    • References
    • Activity
    • Protein
    • Search
    • Smad
    • Ubiquitin
    • Ligase
    • Location
    • Smurf2
    • Human
    • Bp
  • ubiquitin c
    • Ubiquitin-protein

Connections between topic areas Semantic bridges

For SMURF2, one of the stronger structural bridges in this analysis connects SMURF2 with Interactions. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
SMURF2Interactions · splits 4 ⟂ 10
SMURF2Overview · splits 11 ⟂ 3

Map overview Semantic statistics

SMURF2

Nodes14
Edges13
Triples99
Avg. degree1.86
Density0.142857
Components1

Source & methodology

TTTA analyzes the structure around SMURF2 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Interactions & Overview, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — SMURF2 · EN edition · Analysis: TopicsToTalkAbout

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