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SF3B4

Splicing factor 3B subunit 4 is a protein that in humans is encoded by the SF3B4 gene.

Measurement, Interactions & Function

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Interactions

4 related topics

Function

2 related topics

Disease associations

1 related topics

Overview

2 related topics

Key facts & relationships

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Aliases
SF3B4, AFD1, Hsh49, SAP49, SF3b49, splicing factor 3b subunit 4
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1X5T, 1X5U
Band
1q21.2 · 3|3 F2.1
Bgee
mucosa of transverse colon · granulocyte · left uterine tube · left testis · right testis
BioGPS
More reference expression data
Chr.
Chromosome 1 (human) · Chromosome 3 (mouse)

Topics to explore

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Overview

Function

Disease associations

Interactions

Advanced semantic analysis

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Map overview Semantic statistics

SF3B4

Nodes14
Edges13
Triples87
Avg. degree1.86
Density0.142857
Components1

How this topic connects Entity context

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SF3B4

Top relations

Bgee · 19
SF3B4 → embryo, epiblast, ganglionic eminence, genital tubercle, granulocyte, left testis, left uterine tube, mesencephalon, monocyte, mucosa of transverse colon, neural tube, olfactory zone of nasal mucosa, popliteal artery, right coronary artery, right testis, tail of embryo, tibial arteries, ventricular zone, yolk sac
RNA expression pattern · 19
SF3B4 → embryo, epiblast, ganglionic eminence, genital tubercle, granulocyte, left testis, left uterine tube, mesencephalon, monocyte, mucosa of transverse colon, neural tube, olfactory zone of nasal mucosa, popliteal artery, right coronary artery, right testis, tail of embryo, tibial arteries, ventricular zone, yolk sac
Gene ontology · 15
SF3B4 → mRNA processing, mRNA splicing, via spliceosome, nucleic acid binding, nucleolus, nucleoplasm, nucleus, positive regulation of mRNA splicing, via spliceosome, protein binding, ribonucleoprotein complex, RNA binding, RNA splicing, RNA splicing, via transesterification reactions, spliceosomal complex, U12-type spliceosomal complex, U2-type precatalytic spliceosome
related to Disease associations · 7
SF3B4 → Canadian, Finding, FORGE, GEnes, In, Nager, Rare
related to Interactions · 3
SF3B4 → BMPR1A, CDC5L, SF3B2
Band · 2
SF3B4 → 1q21.2, 3|3 F2.1
Chr. · 2
SF3B4 → Chromosome 1 (human), Chromosome 3 (mouse)
End · 2
SF3B4 → 149,927,803 bp, 96,084,880 bp
Aliases · 1
SF3B4 → SF3B4, AFD1, Hsh49, SAP49, SF3b49, splicing factor 3b subunit 4
Available structures · 1
SF3B4 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1X5T, 1X5U

Important terminology Word statistics

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Important terminology

gene human bp chr band splicing protein chromosome factor 3b location subunit mouse ucsc function external encoded search 927 803

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
SF3B4AliasesSF3B4, AFD1, Hsh49, SAP49, SF3b49, splicing factor 3b subunit 41.00infobox
SF3B4Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1X5T, 1X5U1.00infobox
SF3B4Band1q21.21.00infobox
SF3B4Band3|3 F2.11.00infobox
SF3B4Bgeemucosa of transverse colon1.00infobox
SF3B4Bgeegranulocyte1.00infobox
SF3B4Bgeeleft uterine tube1.00infobox
SF3B4Bgeeleft testis1.00infobox
SF3B4Bgeeright testis1.00infobox
SF3B4Bgeepopliteal artery1.00infobox
SF3B4Bgeetibial arteries1.00infobox
SF3B4Bgeemonocyte1.00infobox
SF3B4Bgeeright coronary artery1.00infobox
SF3B4Bgeeolfactory zone of nasal mucosa1.00infobox
SF3B4Bgeetail of embryo1.00infobox
SF3B4Bgeegenital tubercle1.00infobox
SF3B4Bgeeepiblast1.00infobox
SF3B4Bgeeneural tube1.00infobox
SF3B4Bgeeembryo1.00infobox
SF3B4Bgeemesencephalon1.00infobox
SF3B4Bgeeyolk sac1.00infobox
SF3B4Bgeeventricular zone1.00infobox
SF3B4Bgeeganglionic eminence1.00infobox
SF3B4BioGPSMore reference expression data1.00infobox
SF3B4Chr.Chromosome 1 (human)1.00infobox
SF3B4Chr.Chromosome 3 (mouse)1.00infobox
SF3B4DatabasesNCBI: entry; OMA: entry1.00infobox
SF3B4End149,927,803 bp1.00infobox
SF3B4End96,084,880 bp1.00infobox
SF3B4EnsemblENSG000001433681.00infobox

Related concept clusters Concept neighborhoods

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