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Proteome

A proteome is the entire set of proteins that is, or can be, expressed by a genome, cell, tissue, or organism at a certain time. It is the set of expressed proteins in a given type of cell or organism, at a given time, under defined conditions. Proteomics is the study of the proteome.

History, Size and contents & Methods to study the proteome

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Overview

Types of proteomes

Importance in cancer

The proteome in bacterial systems

History

Size and contents

Methods to study the proteome

Protein databases

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Proteome

Nodes85
Edges84
Triples87
Avg. degree1.98
Density0.023529
Components1

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Proteome

Top relations

related to Importance in cancer · 14
Proteome → A-1, ANXA, APOA1, Biomarkers, EFTU, ENOA, G3P, GRP75, KK47, PRDX2, Proteomic, The, Tu, YTS1
related to Mass spectrometry · 13
Proteome → Electrospray Ionization, ESI, Fourier-transform, In May, MALDI, Mass, Matrix Assisted Laser Desorption/Ionization, Nature, Orbitrap Mass Spectrometry, Peptide, Some, Tandem, This
related to Protein databases · 9
Proteome → All, Archived, Because, ELIXIR, The, The Human Protein Atlas, The Plasma Proteome, This, Wayback Machine
has method · 7
Proteome → Additionally, Analyzing, DNA, In, Numerous, Only, While
related to history · 7
Proteome → Electrophoresis, It, Italy, Marc Wilkins, PhD, Siena, Wilkins
related to Separation techniques and electrophoresis · 6
Proteome → Coomassie, In, Proteomics, SDS-PAGE, Spots, The
related to Protein structure prediction · 5
Proteome → DeepMind, EMBL-EBI, In, Protein, Smaller
related to Size and contents · 5
Proteome → Association, DNA, However, In, The
is a · 3
Proteome → collection of proteins found in a particular cell type under a particular set of environmental conditions such as exposure to hormone stimulation.It can also be useful to consid…, entire set of proteins that is, step forward in personalized medicine to tailor drug cocktails to the patient's specific proteomic and genomic profile
related to Chromatography · 3
Proteome → It, Liquid, Some

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Important terminology

proteins protein cell genome human used proteomic study genes different cancer mass set proteomes methods spectrometry bacteria proteomics predicted order

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
Proteomeis aentire set of proteins that is0.90text
Proteomeis acollection of proteins found in a particular cell type under a particular set of environmental conditions such as exposure to hormone stimulation.It can also be useful to consid…0.90text
Proteomeis astep forward in personalized medicine to tailor drug cocktails to the patient's specific proteomic and genomic profile0.90text
exposure to hormone stimulation.It can also be useful to consider an organism's complete proteomeinstance ofhence it is important to distinguish proteomes in cells and organisms.A cellular proteome is the collection of proteins found in a particular cell type under a particular set of…0.80text
which can be conceptualized as the complete set of proteins from all of the various cellular proteomesinstance ofhence it is important to distinguish proteomes in cells and organisms.A cellular proteome is the collection of proteins found in a particular cell type under a particular set of…0.80text
transcriptioninstance ofProteins that showed a differential expression were involved in processes0.80text
apoptosisinstance ofProteins that showed a differential expression were involved in processes0.80text
cell proliferation/differentiation among othersinstance ofProteins that showed a differential expression were involved in processes0.80text
Clostridiuminstance ofin bacteria0.80text
Bacillusinstance ofin bacteria0.80text
proteomic analyses were used in order to investigate how different proteins help each of these bacteria spores germinate after a prolonged period of dormancyinstance ofin bacteria0.80text
DNA repair genes are subject to selection pressure proportional to the amount of information in a genome.Proteoformsinstance ofproposes that modulators of mutation rates0.80text

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