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PEX3: Standards, Interactions & Overview

Peroxisomal biogenesis factor 3 is a protein that in humans is encoded by the PEX3 gene.

Language: English [EN]
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PEX3 topic overview

The analysis highlights Standards, Interactions and Overview as prominent areas in the source structure around PEX3.

Related topics
4
Source areas
2
Connected nodes
6
Extracted relationships
82
Related term clusters
5
Bridge connections
6

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Interactions · 2 topics
Overview · 2 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases
PEX3, PBD10A, TRG18, peroxisomal biogenesis factor 3, PBD10B
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3AJB, 3MK4
Band
6q24.2 · 10|10 A2
Bgee
endothelial cell · right adrenal cortex · left adrenal gland · left adrenal cortex · oocyte
BioGPS
More reference expression data
Chr.
Chromosome 6 (human) · Chromosome 10 (mouse)

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PEX3
4Protein · Gene · Protein-protein interaction

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Interactions

For the semantics nerds

You can skip this section if you’re here for content ideas and keyword inspiration.

Advanced semantic analysis

How PEX3 connects Entity context

The extracted context around PEX3 shows recurring relationship patterns in the source. For example, PEX3 → brown adipose tissue, endothelial cell, Epithelium of choroid plexus, human penis, left adrenal cortex, left adrenal gland, left lobe of liver, oocyte, renal medulla, right adrenal cortex, seminal vesicula, seminiferous tubule, skin of external ear, skin of thigh, spermatid, spermatocyte, testicle, tunica adventitia of aorta, vulva, white adipose tissue Another extracted example is PEX3 → cytosol, endoplasmic reticulum, integral component of membrane, integral component of peroxisomal membrane, lipid binding, membrane, nucleoplasm, peroxisomal membrane, peroxisome, peroxisome membrane biogenesis, peroxisome organization, protein binding, protein dimerization activity, protein import into peroxisome membrane, protein-containing complex, protein-lipid complex, protein-macromolecule adaptor activity, transmembrane transport. Use these groups to spot repeated connection types before inspecting the individual relationships.

PEX3

Top relations

Bgee · 20
PEX3 → brown adipose tissue, endothelial cell, Epithelium of choroid plexus, human penis, left adrenal cortex, left adrenal gland, left lobe of liver, oocyte, renal medulla, right adrenal cortex, seminal vesicula, seminiferous tubule, skin of external ear, skin of thigh, spermatid, spermatocyte, testicle, tunica adventitia of aorta, vulva, white adipose tissue
RNA expression pattern · 20
PEX3 → brown adipose tissue, endothelial cell, Epithelium of choroid plexus, human penis, left adrenal cortex, left adrenal gland, left lobe of liver, oocyte, renal medulla, right adrenal cortex, seminal vesicula, seminiferous tubule, skin of external ear, skin of thigh, spermatid, spermatocyte, testicle, tunica adventitia of aorta, vulva, white adipose tissue
Gene ontology · 18
PEX3 → cytosol, endoplasmic reticulum, integral component of membrane, integral component of peroxisomal membrane, lipid binding, membrane, nucleoplasm, peroxisomal membrane, peroxisome, peroxisome membrane biogenesis, peroxisome organization, protein binding, protein dimerization activity, protein import into peroxisome membrane, protein-containing complex, protein-lipid complex, protein-macromolecule adaptor activity, transmembrane transport
Band · 2
PEX3 → 10|10 A2, 6q24.2
Chr. · 2
PEX3 → Chromosome 10 (mouse), Chromosome 6 (human)
End · 2
PEX3 → 13,428,886 bp, 143,490,616 bp
Aliases · 1
PEX3 → PEX3, PBD10A, TRG18, peroxisomal biogenesis factor 3, PBD10B
Available structures · 1
PEX3 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3AJB, 3MK4
BioGPS · 1
PEX3 → More reference expression data
Databases · 1
PEX3 → NCBI: entry; OMA: entry

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

bp chr human band gene biogenesis chromosome peroxisomal external location protein mouse factor search 490 616 end 143 10 428

PEX3 relationships Subject–Predicate–Object triples

TTTA extracted 82 structured relationships around PEX3. Examples in this analysis include PEX3 → Aliases → PEX3, PBD10A, TRG18, peroxisomal biogenesis factor 3, PBD10B and PEX3 → Available structures → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3AJB, 3MK4. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
PEX3AliasesPEX3, PBD10A, TRG18, peroxisomal biogenesis factor 3, PBD10B1.00infobox
PEX3Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3AJB, 3MK41.00infobox
PEX3Band6q24.21.00infobox
PEX3Band10|10 A21.00infobox
PEX3Bgeeendothelial cell1.00infobox
PEX3Bgeeright adrenal cortex1.00infobox
PEX3Bgeeleft adrenal gland1.00infobox
PEX3Bgeeleft adrenal cortex1.00infobox
PEX3Bgeeoocyte1.00infobox
PEX3Bgeeskin of thigh1.00infobox
PEX3Bgeehuman penis1.00infobox
PEX3Bgeerenal medulla1.00infobox
PEX3Bgeetesticle1.00infobox
PEX3Bgeevulva1.00infobox
PEX3Bgeespermatid1.00infobox
PEX3Bgeeseminiferous tubule1.00infobox
PEX3Bgeeskin of external ear1.00infobox
PEX3Bgeebrown adipose tissue1.00infobox
PEX3Bgeeseminal vesicula1.00infobox
PEX3Bgeespermatocyte1.00infobox
PEX3Bgeetunica adventitia of aorta1.00infobox
PEX3Bgeewhite adipose tissue1.00infobox
PEX3BgeeEpithelium of choroid plexus1.00infobox
PEX3Bgeeleft lobe of liver1.00infobox
PEX3BioGPSMore reference expression data1.00infobox
PEX3Chr.Chromosome 6 (human)1.00infobox
PEX3Chr.Chromosome 10 (mouse)1.00infobox
PEX3DatabasesNCBI: entry; OMA: entry1.00infobox
PEX3End143,490,616 bp1.00infobox
PEX3End13,428,886 bp1.00infobox

Related concept clusters Related term clusters

The concept neighborhoods around PEX3 bring nearby vocabulary together. In this analysis, examples include External, Protein and Search. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • gene
    • Location
    • Peroxisomal
    • Pex3
    • Chromosome
    • Human
    • Bp
    • Chr
    • End
    • External
    • Mouse
    • Protein
    • Search
  • PEX3
    • External
    • Protein
    • Search
    • Location
    • Chromosome
    • Human
    • Bp
    • Chr
    • Interactions
    • Links
    • Reading
    • References
  • pex3
    • External
    • Protein
    • Search
    • Location
    • Chromosome
    • Human
    • Bp
    • Chr
    • Interactions
    • Links
    • Reading
    • References
  • interactions
    • Links
    • Reading
    • References
    • External
    • Omim
    • Search
    • Location
    • Peroxisomal
    • Pex3
    • Chromosome
    • Human
    • Bp
  • protein
    • Ncbi
    • Search

Connections between topic areas Semantic bridges

For PEX3, one of the stronger structural bridges in this analysis connects PEX3 with Overview. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
PEX3 — Overview · splits 4 ⟂ 3
PEX3 — Interactions · splits 4 ⟂ 3

Map overview Semantic statistics

PEX3

Nodes7
Edges6
Triples82
Avg. degree1.71
Density0.285714
Components1

Source & methodology

TTTA analyzes the structure around PEX3 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Standards, Interactions & Overview, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — PEX3 · EN edition · Analysis: TopicsToTalkAbout

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