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PEX19: Standards, Interactions & Overview

Peroxisomal biogenesis factor 19 is a protein that in humans is encoded by the PEX19 gene.

Language: English [EN]
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PEX19 topic overview

The analysis highlights Standards, Interactions and Overview as prominent areas in the source structure around PEX19.

Related topics
12
Source areas
2
Connected nodes
14
Extracted relationships
91
Related term clusters
5
Bridge connections
14

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Interactions · 10 topics
Overview · 2 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases
PEX19, D1S2223E, HK33, PBD12A, PMP1, PMPI, PXF, PXMP1, peroxisomal biogenesis factor 19
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2W85, 2WL8, 3AJB, 3MK4
Band
1q23.2 · 1 H3|1 79.54 cM
Bgee
muscle of thigh · gastrocnemius muscle · Skeletal muscle tissue of biceps brachii · ventricular zone · epithelium of colon
BioGPS
More reference expression data
Chr.
Chromosome 1 (human) · Chromosome 1 (mouse)

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Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Interactions

For the semantics nerds

You can skip this section if you’re here for content ideas and keyword inspiration.

Advanced semantic analysis

How PEX19 connects Entity context

The extracted context around PEX19 shows recurring relationship patterns in the source. For example, PEX19 → ATPase binding, brush border membrane, chaperone-mediated protein folding, cytoplasm, cytosol, establishment of protein localization to peroxisome, integral component of membrane, membrane, negative regulation of lipid binding, nucleoplasm, nucleus, peroxisomal membrane, peroxisome, peroxisome fission, peroxisome membrane biogenesis, peroxisome membrane class-1 targeting sequence binding, peroxisome organization, protein binding, protein import into peroxisome membrane, protein N-terminus binding Another extracted example is PEX19 → abdominal fat, brown adipose tissue, digastric muscle, epithelium of colon, gastrocnemius muscle, islet of Langerhans, lip, muscle of thigh, right kidney, right lobe of liver, Skeletal muscle tissue of biceps brachii, subcutaneous adipose tissue, tail of embryo, temporal muscle, thoracic diaphragm, triceps brachii muscle, ventricular zone, yolk sac. Use these groups to spot repeated connection types before inspecting the individual relationships.

PEX19

Top relations

Gene ontology · 24
PEX19 → ATPase binding, brush border membrane, chaperone-mediated protein folding, cytoplasm, cytosol, establishment of protein localization to peroxisome, integral component of membrane, membrane, negative regulation of lipid binding, nucleoplasm, nucleus, peroxisomal membrane, peroxisome, peroxisome fission, peroxisome membrane biogenesis, peroxisome membrane class-1 targeting sequence binding, peroxisome organization, protein binding, protein import into peroxisome membrane, protein N-terminus binding
Bgee · 18
PEX19 → abdominal fat, brown adipose tissue, digastric muscle, epithelium of colon, gastrocnemius muscle, islet of Langerhans, lip, muscle of thigh, right kidney, right lobe of liver, Skeletal muscle tissue of biceps brachii, subcutaneous adipose tissue, tail of embryo, temporal muscle, thoracic diaphragm, triceps brachii muscle, ventricular zone, yolk sac
RNA expression pattern · 18
PEX19 → abdominal fat, brown adipose tissue, digastric muscle, epithelium of colon, gastrocnemius muscle, islet of Langerhans, lip, muscle of thigh, right kidney, right lobe of liver, Skeletal muscle tissue of biceps brachii, subcutaneous adipose tissue, tail of embryo, temporal muscle, thoracic diaphragm, triceps brachii muscle, ventricular zone, yolk sac
related to Interactions · 8
PEX19 → ABCD1, ABCD2, ABCD3, PEX10, PEX11B, PEX12, PEX13, PEX16
Band · 2
PEX19 → 1 H3|1 79.54 cM, 1q23.2
Chr. · 2
PEX19 → Chromosome 1 (human), Chromosome 1 (mouse)
End · 2
PEX19 → 160,286,348 bp, 171,964,060 bp
Aliases · 1
PEX19 → PEX19, D1S2223E, HK33, PBD12A, PMP1, PMPI, PXF, PXMP1, peroxisomal biogenesis factor 19
Available structures · 1
PEX19 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2W85, 2WL8, 3AJB, 3MK4
BioGPS · 1
PEX19 → More reference expression data

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

bp chr human band gene peroxisomal biogenesis chromosome factor 19 location protein mouse external pdb uniprot p40855 search 286 348

PEX19 relationships Subject–Predicate–Object triples

TTTA extracted 91 structured relationships around PEX19. Examples in this analysis include PEX19 → Aliases → PEX19, D1S2223E, HK33, PBD12A, PMP1, PMPI, PXF, PXMP1, peroxisomal biogenesis factor 19 and PEX19 → Available structures → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2W85, 2WL8, 3AJB, 3MK4. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
PEX19AliasesPEX19, D1S2223E, HK33, PBD12A, PMP1, PMPI, PXF, PXMP1, peroxisomal biogenesis factor 191.00infobox
PEX19Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2W85, 2WL8, 3AJB, 3MK41.00infobox
PEX19Band1q23.21.00infobox
PEX19Band1 H3|1 79.54 cM1.00infobox
PEX19Bgeemuscle of thigh1.00infobox
PEX19Bgeegastrocnemius muscle1.00infobox
PEX19BgeeSkeletal muscle tissue of biceps brachii1.00infobox
PEX19Bgeeventricular zone1.00infobox
PEX19Bgeeepithelium of colon1.00infobox
PEX19Bgeeabdominal fat1.00infobox
PEX19Bgeethoracic diaphragm1.00infobox
PEX19Bgeesubcutaneous adipose tissue1.00infobox
PEX19Bgeeislet of Langerhans1.00infobox
PEX19Bgeeright lobe of liver1.00infobox
PEX19Bgeeyolk sac1.00infobox
PEX19Bgeetail of embryo1.00infobox
PEX19Bgeelip1.00infobox
PEX19Bgeeright kidney1.00infobox
PEX19Bgeedigastric muscle1.00infobox
PEX19Bgeetemporal muscle1.00infobox
PEX19Bgeebrown adipose tissue1.00infobox
PEX19Bgeetriceps brachii muscle1.00infobox
PEX19BioGPSMore reference expression data1.00infobox
PEX19Chr.Chromosome 1 (human)1.00infobox
PEX19Chr.Chromosome 1 (mouse)1.00infobox
PEX19DatabasesNCBI: entry; OMA: entry1.00infobox
PEX19End160,286,348 bp1.00infobox
PEX19End171,964,060 bp1.00infobox
PEX19EnsemblENSG000001627351.00infobox
PEX19Entrez58241.00infobox

Related concept clusters Related term clusters

The concept neighborhoods around PEX19 bring nearby vocabulary together. In this analysis, examples include Protein, Search and Location. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • PEX19
    • Protein
    • Search
    • Location
    • Chromosome
    • Human
    • Bp
    • Chr
    • External
    • Interactions
    • Links
    • Reading
    • References
  • pex19
    • Protein
    • Search
    • Location
    • Chromosome
    • Human
    • Bp
    • Chr
    • External
    • Interactions
    • Links
    • Reading
    • References
  • gene
    • Location
    • Pex19
    • Chromosome
    • Human
    • Peroxisomal
    • Bp
    • Chr
    • End
    • H3
    • Mouse
    • Protein
    • Search
  • interactions
    • External
    • Links
    • Reading
    • References
    • Available
    • Omim
    • Pdb
    • Search
    • Location
    • Pex19
    • Chromosome
    • Human
  • protein
    • Search
    • Uniprot

Connections between topic areas Semantic bridges

For PEX19, one of the stronger structural bridges in this analysis connects PEX19 with Interactions. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
PEX19 — Interactions · splits 4 ⟂ 11
PEX19 — Overview · splits 12 ⟂ 3

Map overview Semantic statistics

PEX19

Nodes15
Edges14
Triples91
Avg. degree1.87
Density0.133333
Components1

Source & methodology

TTTA analyzes the structure around PEX19 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Standards, Interactions & Overview, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — PEX19 · EN edition · Analysis: TopicsToTalkAbout

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