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PDLIM1

PDZ and LIM domain protein 1 is a protein that in humans is encoded by the PDLIM1 gene.

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5 related topics

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Aliases
PDLIM1, CLIM1, CLP-36, CLP36, HEL-S-112, hCLIM1, PDZ and LIM domain 1
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1X62, 2PKT
Band
10q23.33 · 19|19 C3
Bgee
lower lobe of lung · nasal epithelium · mucosa of urinary bladder · right lung · pericardium
BioGPS
More reference expression data
Chr.
Chromosome 10 (human) · Chromosome 19 (mouse)

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Overview

Interactions

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Map overview Semantic statistics

PDLIM1

Nodes10
Edges9
Triples85
Avg. degree1.8
Density0.2
Components1

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PDLIM1

Top relations

Bgee · 20
PDLIM1 → colon, duodenum, esophagus, genital tubercle, gingival epithelium, ileum, jejunum, lens, lower lobe of lung, mucosa of urinary bladder, nasal epithelium, olfactory zone of nasal mucosa, palpebral conjunctiva, pericardium, placenta, right lung, upper lobe of left lung, upper lobe of lung, uterus, zygote
Gene ontology · 20
PDLIM1 → actin binding, actin cytoskeleton organization, cadherin binding involved in cell-cell adhesion, cell-cell adhesion, cytoplasm, cytoskeleton, development of the heart, filamentous actin, focal adhesion, metal ion binding, muscle alpha-actinin binding, muscle structure development, positive regulation of nucleic acid-templated transcription, regulation of transcription, DNA-templated, response to hypoxia, response to oxidative stress, stress fiber, transcription coactivator activity, transcription regulator complex, Z discdkac
RNA expression pattern · 20
PDLIM1 → colon, duodenum, esophagus, genital tubercle, gingival epithelium, ileum, jejunum, lens, lower lobe of lung, mucosa of urinary bladder, nasal epithelium, olfactory zone of nasal mucosa, palpebral conjunctiva, pericardium, placenta, right lung, upper lobe of left lung, upper lobe of lung, uterus, zygote
Band · 2
PDLIM1 → 10q23.33, 19|19 C3
Chr. · 2
PDLIM1 → Chromosome 10 (human), Chromosome 19 (mouse)
End · 2
PDLIM1 → 40,260,286 bp, 95,291,012 bp
related to Interactions · 2
PDLIM1 → Actinin, Estrogen
Aliases · 1
PDLIM1 → PDLIM1, CLIM1, CLP-36, CLP36, HEL-S-112, hCLIM1, PDZ and LIM domain 1
Available structures · 1
PDLIM1 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1X62, 2PKT
BioGPS · 1
PDLIM1 → More reference expression data

Important terminology Word statistics

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Important terminology

bp chr human band gene chromosome 10 location protein mouse pdz lim domain search 291 012 end 95 19 260

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
PDLIM1AliasesPDLIM1, CLIM1, CLP-36, CLP36, HEL-S-112, hCLIM1, PDZ and LIM domain 11.00infobox
PDLIM1Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1X62, 2PKT1.00infobox
PDLIM1Band10q23.331.00infobox
PDLIM1Band19|19 C31.00infobox
PDLIM1Bgeelower lobe of lung1.00infobox
PDLIM1Bgeenasal epithelium1.00infobox
PDLIM1Bgeemucosa of urinary bladder1.00infobox
PDLIM1Bgeeright lung1.00infobox
PDLIM1Bgeepericardium1.00infobox
PDLIM1Bgeegingival epithelium1.00infobox
PDLIM1Bgeeupper lobe of lung1.00infobox
PDLIM1Bgeeolfactory zone of nasal mucosa1.00infobox
PDLIM1Bgeepalpebral conjunctiva1.00infobox
PDLIM1Bgeeupper lobe of left lung1.00infobox
PDLIM1Bgeeileum1.00infobox
PDLIM1Bgeeplacenta1.00infobox
PDLIM1Bgeejejunum1.00infobox
PDLIM1Bgeeduodenum1.00infobox
PDLIM1Bgeeesophagus1.00infobox
PDLIM1Bgeecolon1.00infobox
PDLIM1Bgeeuterus1.00infobox
PDLIM1Bgeezygote1.00infobox
PDLIM1Bgeelens1.00infobox
PDLIM1Bgeegenital tubercle1.00infobox
PDLIM1BioGPSMore reference expression data1.00infobox
PDLIM1Chr.Chromosome 10 (human)1.00infobox
PDLIM1Chr.Chromosome 19 (mouse)1.00infobox
PDLIM1DatabasesNCBI: entry; OMA: entry1.00infobox
PDLIM1End95,291,012 bp1.00infobox
PDLIM1End40,260,286 bp1.00infobox

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