PABPC1

Use the mouse wheel or two fingers (on touchscreens) to zoom in and out of the map.

Map view:

Zoom: 100%

More settings

Connection length 100% Label size 100% Node size 100% Line width 100% Label width 100%

Export map as:

PABPC1 topic overview

The analysis highlights Interactions, Function and Overview as prominent areas in the source structure around PABPC1.

Related topics: 12
Source areas: 3
Connected nodes: 15
Extracted relationships: 123
Concept neighborhoods: 7
Bridge connections: 15

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Interactions · 8 topics

Function · 2 topics

Overview · 2 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases: PABPC1, PAB1, PABP, PABP1, PABPC2, PABPL1, poly(A) binding protein cytoplasmic 1
Available structures: Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1CVJ, 1G9L, 1JGN, 1JH4, 2K8G, 2RQG, 2RQH, 2X04, 3KTP, 3KTR, 3KUI, 3KUJ, 3KUR, 3KUS, 3KUT, 3PKN, 3PTH, 4F02,…
Band: 8q22.3 · 15|15 B3.1
Bgee: parotid gland · pylorus · gonad · amniotic fluid · vulva
BioGPS: n/a
Chr.: Chromosome 8 (human) · Chromosome 15 (mouse)

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Function

Poly(A)-binding proteins Poly(A)-binding protein
Nonsense-mediated decay

Interactions

Interact Protein-protein interaction
ANAPC5
CNOT7
EIF4G3
EIF4G1 Eukaryotic translation initiation factor 4 gamma
GSPT2
PAIP1
PAIP2

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How PABPC1 connects Entity context

The extracted context around PABPC1 shows recurring relationship patterns in the source. For example, PABPC1 → catalytic step 2 spliceosome, cytoplasm, cytoplasmic ribonucleoprotein granule, cytoplasmic stress granule, cytosol, dendrite, extracellular exosome, focal adhesion, gene silencing, membrane, messenger ribonucleoprotein complex, mRNA 3'-UTR binding, mRNA binding, mRNA polyadenylation, mRNA processing, mRNA splicing, via spliceosome, mRNA stabilization, negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, nuclear-transcribed mRNA poly(A) tail shortening Another extracted example is PABPC1 → amniotic fluid, embryo, genital tubercle, gonad, lip, monocyte, morula, neural layer of retina, nipple, oral cavity, parotid gland, pylorus, spermatid, spermatocyte, tail of embryo, tonsil, trabecular bone, ventricular zone, vulva, yolk sac. Use these groups to spot repeated connection types before inspecting the individual relationships.

Top relations

Gene ontology · 39

PABPC1 → catalytic step 2 spliceosome, cytoplasm, cytoplasmic ribonucleoprotein granule, cytoplasmic stress granule, cytosol, dendrite, extracellular exosome, focal adhesion, gene silencing, membrane, messenger ribonucleoprotein complex, mRNA 3'-UTR binding, mRNA binding, mRNA polyadenylation, mRNA processing, mRNA splicing, via spliceosome, mRNA stabilization, negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, nuclear-transcribed mRNA poly(A) tail shortening

Bgee · 20

PABPC1 → amniotic fluid, embryo, genital tubercle, gonad, lip, monocyte, morula, neural layer of retina, nipple, oral cavity, parotid gland, pylorus, spermatid, spermatocyte, tail of embryo, tonsil, trabecular bone, ventricular zone, vulva, yolk sac

RNA expression pattern · 20

related to Function · 7

PABPC1 → In, NMD, PAB, PABP, PABPs, The, This

related to Interactions · 6

PABPC1 → ANAPC5, CNOT7, EIF4G1, EIF4G3, GSPT2, PAIP1

Band · 2

PABPC1 → 15|15 B3.1, 8q22.3

Chr. · 2

PABPC1 → Chromosome 15 (mouse), Chromosome 8 (human)

End · 2

PABPC1 → 100,722,809 bp, 36,609,912 bp

Aliases · 1

PABPC1 → PABPC1, PAB1, PABP, PABP1, PABPC2, PABPL1, poly(A) binding protein cytoplasmic 1

Available structures · 1

PABPC1 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1CVJ, 1G9L, 1JGN, 1JH4, 2K8G, 2RQG, 2RQH, 2X04, 3KTP, 3KTR, 3KUI, 3KUJ, 3KUR, 3KUS, 3KUT, 3PKN, 3PTH, 4F02,…

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

protein mrna pabp1 bp poly gene nucleus chr human band location chromosome function cytoplasm tail translation stability binds degradation binding

PABPC1 relationships Subject–Predicate–Object triples

TTTA extracted 123 structured relationships around PABPC1. Examples in this analysis include PABPC1 → Aliases → PABPC1, PAB1, PABP, PABP1, PABPC2, PABPL1, poly(A) binding protein cytoplasmic 1 and PABPC1 → Available structures → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1CVJ, 1G9L, 1JGN, 1JH4, 2K8G, 2RQG, 2RQH, 2X04, 3KTP, 3KTR, 3KUI, 3KUJ, 3KUR, 3KUS, 3KUT, 3PKN, 3PTH, 4F02,…. The table shows each extracted connection, where it came from and its confidence.

Subject	Predicate	Object	Confidence	Src
PABPC1	Aliases	PABPC1, PAB1, PABP, PABP1, PABPC2, PABPL1, poly(A) binding protein cytoplasmic 1	1.00	infobox
PABPC1	Available structures	Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1CVJ, 1G9L, 1JGN, 1JH4, 2K8G, 2RQG, 2RQH, 2X04, 3KTP, 3KTR, 3KUI, 3KUJ, 3KUR, 3KUS, 3KUT, 3PKN, 3PTH, 4F02,…	1.00	infobox
PABPC1	Band	8q22.3	1.00	infobox
PABPC1	Band	15\|15 B3.1	1.00	infobox
PABPC1	Bgee	parotid gland	1.00	infobox
PABPC1	Bgee	pylorus	1.00	infobox
PABPC1	Bgee	gonad	1.00	infobox
PABPC1	Bgee	amniotic fluid	1.00	infobox
PABPC1	Bgee	vulva	1.00	infobox
PABPC1	Bgee	tonsil	1.00	infobox
PABPC1	Bgee	nipple	1.00	infobox
PABPC1	Bgee	trabecular bone	1.00	infobox
PABPC1	Bgee	monocyte	1.00	infobox
PABPC1	Bgee	oral cavity	1.00	infobox
PABPC1	Bgee	tail of embryo	1.00	infobox
PABPC1	Bgee	genital tubercle	1.00	infobox
PABPC1	Bgee	ventricular zone	1.00	infobox
PABPC1	Bgee	yolk sac	1.00	infobox
PABPC1	Bgee	spermatocyte	1.00	infobox
PABPC1	Bgee	morula	1.00	infobox
PABPC1	Bgee	neural layer of retina	1.00	infobox
PABPC1	Bgee	spermatid	1.00	infobox
PABPC1	Bgee	embryo	1.00	infobox
PABPC1	Bgee	lip	1.00	infobox
PABPC1	BioGPS	n/a	1.00	infobox
PABPC1	Chr.	Chromosome 8 (human)	1.00	infobox
PABPC1	Chr.	Chromosome 15 (mouse)	1.00	infobox
PABPC1	Databases	NCBI: entry; OMA: entry	1.00	infobox
PABPC1	End	100,722,809 bp	1.00	infobox
PABPC1	End	36,609,912 bp	1.00	infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around PABPC1 bring nearby vocabulary together. In this analysis, examples include Cytoplasm, Gene and Protein. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

PABPC1
- Cytoplasm
- Gene
- Protein
- Poly
- Mrna
- Cytoplasmic
- Found
- Search
- Binding
- Decay
- Function
- Nonsense-mediated
pabpc1
- Cytoplasm
- Gene
- Protein
- Poly
- Mrna
- Cytoplasmic
- Found
- Search
- Binding
- Decay
- Function
- Nonsense-mediated
protein
- Function
- Location
- Cytoplasmic
- Rna
- Search
- Translation
- Binding
- Stability
- Chromosome
- Human
- Bp
- Chr
gene
- Chromosome
- Human
- Location
- Bp
- Chr
- Protein
- B3
- Cytoplasmic
- End
- Humans
- Mouse
- Search
function
- Location
- Cytoplasmic
- Rna
- Search
- Protein
- Binding
- Chromosome
- Human
- Bp
- Chr
- Gene
- Pabp1
nonsense-mediated decay
- Nonsense-mediated
- Required
- End
- Found
- Mouse
- Mrna
- Rna
- Search
- Translation
- Function
- Pabpc1
- Stability
poly(a)-binding proteins
- Tail
- Found
- Search
- Two
- Stability
- Cytoplasm
- Protein
- B3
- End
- Mouse
- Poly
- Proteins

Connections between topic areas Semantic bridges

For PABPC1, one of the stronger structural bridges in this analysis connects PABPC1 with Interactions. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3

PABPC1 — Interactions · splits 7 ⟂ 9

PABPC1 — Overview · splits 13 ⟂ 3

PABPC1 — Function · splits 13 ⟂ 3

Map overview Semantic statistics

PABPC1

Nodes16

Edges15

Triples123

Avg. degree1.88

Density0.125

Components1

Source & methodology

TTTA analyzes the structure around PABPC1 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Interactions, Function & Overview, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — PABPC1 · EN edition · Analysis: TopicsToTalkAbout