MreB

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MreB topic overview

The analysis highlights Structure and relationship to actin, Overview and Spatial regulation by cell geometry as prominent areas in the source structure around MreB.

Related topics: 48
Source areas: 7
Connected nodes: 55
Extracted relationships: 60
Concept neighborhoods: 24
Bridge connections: 55

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Overview · 19 topics

Structure and relationship to actin · 11 topics

Distribution across bacteria · 5 topics

Spatial regulation by cell geometry · 5 topics

Discovery and nomenclature · 4 topics

Filament organization and dynamics · 2 topics

Function in cell-wall synthesis and shape · 2 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

AlphaFold: IPR004753 · PF06723
Available protein structures:: IPR004753 · PF06723
CDD: cd10225
InterPro: IPR004753
PDB: 1jce IPR004753 PF06723 (ECOD; PDBsum)
Pfam: PF06723

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Protein
Bacteria
Homolog Homology (biology)
Actin
Cytoskeleton
Eukaryotes Eukaryote
Tubulin
FtsZ
Crescentin
Prokaryotic cytoskeleton
Shape Bacterial cell structure
Escherichia coli
A22 A22 (antibiotic)
Bacillus subtilis
Class-A penicillin-binding proteins Penicillin-binding protein
Cell membrane
Peptidoglycan
Lateral wall Cell wall
Elongation Cell growth

Discovery and nomenclature

Structure and relationship to actin

Sequence identity
Fold Protein fold
ATP Adenosine triphosphate
Nucleotide-binding cleft Active site
Polymerize Polymerization
Thermotoga maritima
GTP Guanosine triphosphate
Caulobacter Caulobacter crescentus
Protofilaments Protofilament
Antiparallel Antiparallel (biochemistry)
Helical Helix

Function in cell-wall synthesis and shape

Glycosyltransferase
Transpeptidase DD-Transpeptidase

Filament organization and dynamics

Spatial regulation by cell geometry

Distribution across bacteria

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How MreB connects Entity context

The extracted context around MreB shows recurring relationship patterns in the source. For example, MreB → Chlamydia, Corynebacterium, DivIVA-family, Genes, LytE, Mbl, MreB's, MreB-based, MreB-family, MreB-like, MreBH, Mycobacterium, PBP2, Some, Wag31 Another extracted example is MreB → An, How MreB, In, PBP2, Rather, Rod, Rod-complex, RodA, RodZ, SEDS, These. Use these groups to spot repeated connection types before inspecting the individual relationships.

Top relations

related to Distribution across bacteria · 15

MreB → Chlamydia, Corynebacterium, DivIVA-family, Genes, LytE, Mbl, MreB's, MreB-based, MreB-family, MreB-like, MreBH, Mycobacterium, PBP2, Some, Wag31

related to Function in cell-wall synthesis and shape · 11

MreB → An, How MreB, In, PBP2, Rather, Rod, Rod-complex, RodA, RodZ, SEDS, These

related to Structure and relationship to actin · 7

MreB → Although MreB, ATP, Caulobacter MreB, GTP, High-resolution, Thermotoga, This

related to Filament organization and dynamics · 6

MreB → Current, Early, Electron, N-terminal, Rod, This

related to Spatial regulation by cell geometry · 6

MreB → Gaussian, In, L-form, MreB-dependent, The, This

related to Discovery and nomenclature · 3

MreB → MreC, MreD, The

AlphaFold · 2

MreB → IPR004753, PF06723

Available protein structures: · 2

MreB → IPR004753, PF06723

CDD · 1

MreB → cd10225

InterPro · 1

MreB → IPR004753

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

cell filaments protein bacteria actin peptidoglycan coli rod shape cell-wall synthesis cytoskeleton wall helical membrane around width control among subtilis

MreB relationships Subject–Predicate–Object triples

TTTA extracted 60 structured relationships around MreB. Examples in this analysis include MreB → AlphaFold → IPR004753 and MreB → AlphaFold → PF06723. The table shows each extracted connection, where it came from and its confidence.

Subject	Predicate	Object	Confidence	Src
MreB	AlphaFold	IPR004753	1.00	infobox
MreB	AlphaFold	PF06723	1.00	infobox
MreB	Available protein structures:	IPR004753	1.00	infobox
MreB	Available protein structures:	PF06723	1.00	infobox
MreB	CDD	cd10225	1.00	infobox
MreB	InterPro	IPR004753	1.00	infobox
MreB	PDB	1jce IPR004753 PF06723 (ECOD; PDBsum)	1.00	infobox
MreB	Pfam	PF06723	1.00	infobox
MreB	Symbol	MreB	1.00	infobox
MreB	is a	protein found in bacteria that is a homolog of actin	0.90	text
Corynebacterium	instance of	notably Mycobacterium and related genera	0.80	text
grow mainly from their poles rather than through a canonical MreB-based lateral-wall system	instance of	notably Mycobacterium and related genera	0.80	text

Related concept clusters Concept neighborhoods

The concept neighborhoods around MreB bring nearby vocabulary together. In this analysis, examples include Filaments, Cell and Actin. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

MreB
- Filaments
- Cell
- Actin
- Cell-wall
- Coli
- Rod
- Synthesis
- Bacteria
- Membrane
- Shape
- Protein
- Structures
mreb
- Filaments
- Cell
- Actin
- Cell-wall
- Coli
- Rod
- Synthesis
- Bacteria
- Membrane
- Shape
- Protein
- Structures
bacteria
- Spherical
- Mreb
- Cell
- Shape
- Actin
- Cell-wall
- Synthesis
- Protein
- Major
- Also
- Building
- Cells
escherichia coli
- Cells
- Gene
- Protein
- Species
- Spherical
- Width
- Mreb
- Shape
- Rod
- Filaments
- Major
- Cell
cell membrane
- Around
- Structures
- Subtilis
- Filaments
- Peptidoglycan
- Helical
- Long
- Move
- Width
- Mreb
- Cell-wall
- Protein
l-form bacteria
- Spherical
- Mreb
- Cell
- Shape
- Actin
- Cell-wall
- Synthesis
- Protein
- Major
- Also
- Building
- Cells
cell division
- Around
- Filaments
- Peptidoglycan
- Long
- Move
- Subtilis
- Width
- Mreb
- Cell-wall
- Along
- Building
- Cell's
function in cell-wall synthesis and shape
- Synthesis
- Also
- Rod
- Subtilis
- Filaments
- Mreb
- Cell-wall
- Shape
- Wall
- Peptidoglycan
- Cell's
- Filament

Connections between topic areas Semantic bridges

For MreB, one of the stronger structural bridges in this analysis connects MreB with Overview. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3

MreB — Overview · splits 36 ⟂ 20

MreB — Structure and relationship to actin · splits 44 ⟂ 12

MreB — Spatial regulation by cell geometry · splits 50 ⟂ 6

MreB — Distribution across bacteria · splits 50 ⟂ 6

MreB — Discovery and nomenclature · splits 51 ⟂ 5

MreB — Function in cell-wall synthesis and shape · splits 53 ⟂ 3

MreB — Filament organization and dynamics · splits 53 ⟂ 3

Map overview Semantic statistics

MreB

Nodes56

Edges55

Triples60

Avg. degree1.96

Density0.035714

Components1

Source & methodology

TTTA analyzes the structure around MreB to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Structure and relationship to actin, Overview & Spatial regulation by cell geometry, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — MreB · EN edition · Analysis: TopicsToTalkAbout