MBD1

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Explore the main themes, entities and connections around MBD1. Start with the topic map, then use the sections below for research and deeper semantic analysis.

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Interactions

Interact ATF7IP CBX5 CHAF1A SUV39H1

5 related topics

Overview

Protein Gene Methylated DNA Transcription

5 related topics

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases: MBD1, CXXC3, PCM1, RFT, methyl-CpG binding domain protein 1
Available structures: Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1IG4, 1D9N, 4D4W
Band: 18q21.1 · 18 E2|18 50.7 cM
Bgee: left testis · right testis · parotid gland · pituitary gland · anterior pituitary
BioGPS: More reference expression data
Chr.: Chromosome 18 (human) · Chromosome 18 (mouse)

Topics to explore

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Overview

Protein
Gene
Methylated Methylation
DNA
Transcription Transcription (genetics)

Interactions

Interact Protein-protein interaction
ATF7IP
CBX5 CBX5 (gene)
CHAF1A
SUV39H1

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

Map overview Semantic statistics

Nodes13

Edges12

Triples97

Avg. degree1.85

Density0.153846

Components1

How this topic connects Entity context

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MBD1

Top relations

Bgee · 19

MBD1 → anterior pituitary, lacrimal gland, left colon, left lobe of liver, left ovary, left testis, lobe of prostate, lumbar subsegment of spinal cord, middle temporal gyrus, neural layer of retina, parotid gland, pituitary gland, right lobe of thyroid gland, right ovary, right testis, skin of leg, thymus, tibiofemoral joint, vestibular membrane of cochlear duct

Gene ontology · 19

MBD1 → chromosome, DNA binding, DNA methylation-dependent heterochromatin assembly, DNA-binding transcription factor activity, RNA polymerase II-specific, double-stranded methylated DNA binding, metal ion binding, methyl-CpG binding, negative regulation of transcription by RNA polymerase II, negative regulation of transcription, DNA-templated, nuclear matrix, nuclear speck, nucleoplasm, nucleus, protein binding, regulation of transcription by RNA polymerase II, regulation of transcription, DNA-templated, transcription by RNA polymerase II, transcription, DNA-templated, zinc ion binding

RNA expression pattern · 19

related to Function · 13

MBD1 → All, COOH, CpG, CXXC, DNA, Each, Five, Human, MBD, MBD2, MBD3, MBD4, MECP2

related to Interactions · 4

MBD1 → ATF7IP, CBX5, CHAF1A, SUV39H1

Band · 2

MBD1 → 18 E2|18 50.7 cM, 18q21.1

Chr. · 2

MBD1 → Chromosome 18 (human), Chromosome 18 (mouse)

End · 2

MBD1 → 50,281,774 bp, 74,415,803 bp

Aliases · 1

MBD1 → MBD1, CXXC3, PCM1, RFT, methyl-CpG binding domain protein 1

Available structures · 1

MBD1 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1IG4, 1D9N, 4D4W

Important terminology Word statistics

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Important terminology

gene methylated bp protein human chromosome chr band 18 dna transcription domain binding modification location methyl-cpg encoded binds sequences mouse

Entity relationships Subject–Predicate–Object triples

Subject	Predicate	Object	Confidence	Src
MBD1	Aliases	MBD1, CXXC3, PCM1, RFT, methyl-CpG binding domain protein 1	1.00	infobox
MBD1	Available structures	Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1IG4, 1D9N, 4D4W	1.00	infobox
MBD1	Band	18q21.1	1.00	infobox
MBD1	Band	18 E2\|18 50.7 cM	1.00	infobox
MBD1	Bgee	left testis	1.00	infobox
MBD1	Bgee	right testis	1.00	infobox
MBD1	Bgee	parotid gland	1.00	infobox
MBD1	Bgee	pituitary gland	1.00	infobox
MBD1	Bgee	anterior pituitary	1.00	infobox
MBD1	Bgee	skin of leg	1.00	infobox
MBD1	Bgee	middle temporal gyrus	1.00	infobox
MBD1	Bgee	left ovary	1.00	infobox
MBD1	Bgee	right lobe of thyroid gland	1.00	infobox
MBD1	Bgee	right ovary	1.00	infobox
MBD1	Bgee	lacrimal gland	1.00	infobox
MBD1	Bgee	lobe of prostate	1.00	infobox
MBD1	Bgee	left lobe of liver	1.00	infobox
MBD1	Bgee	left colon	1.00	infobox
MBD1	Bgee	neural layer of retina	1.00	infobox
MBD1	Bgee	vestibular membrane of cochlear duct	1.00	infobox
MBD1	Bgee	lumbar subsegment of spinal cord	1.00	infobox
MBD1	Bgee	tibiofemoral joint	1.00	infobox
MBD1	Bgee	thymus	1.00	infobox
MBD1	BioGPS	More reference expression data	1.00	infobox
MBD1	Chr.	Chromosome 18 (human)	1.00	infobox
MBD1	Chr.	Chromosome 18 (mouse)	1.00	infobox
MBD1	Databases	NCBI: entry; OMA: entry	1.00	infobox
MBD1	End	50,281,774 bp	1.00	infobox
MBD1	End	74,415,803 bp	1.00	infobox
MBD1	Ensembl	ENSG00000141644	1.00	infobox

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