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LMO4: Regions, Interactions & Overview

LIM domain transcription factor LMO4 is a protein that in humans is encoded by the LMO4 gene.

Language: English [EN]
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LMO4 topic overview

The analysis highlights Regions, Interactions and Overview as prominent areas in the source structure around LMO4.

Related topics
8
Source areas
2
Connected nodes
10
Extracted relationships
87
Concept neighborhoods
6
Bridge connections
10

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Interactions · 4 topics
Overview · 4 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases
LMO4, LIM domain only 4
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2L4Z
Band
1p22.3 · 3 H2|3 68.61 cM
Bgee
dorsolateral prefrontal cortex · prefrontal cortex · Brodmann area 46 · superior frontal gyrus · parietal lobe
BioGPS
More reference expression data
Chr.
Chromosome 1 (human) · Chromosome 3 (mouse)

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Interactions

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How LMO4 connects Entity context

The extracted context around LMO4 shows recurring relationship patterns in the source. For example, LMO4 → cell leading edge, cis-regulatory region sequence-specific DNA binding, DNA-binding transcription factor activity, metal ion binding, negative regulation of protein-containing complex assembly, neural tube closure, positive regulation of kinase activity, positive regulation of transcription by RNA polymerase II, protein binding, regulation of cell activation, regulation of cell fate specification, regulation of cell migration, regulation of transcription, DNA-templated, spinal cord association neuron differentiation, spinal cord motor neuron differentiation, thymus development, transcription by RNA polymerase II, transcription factor binding, transcription regulator complex, transcription, DNA-templated Another extracted example is LMO4 → anterior cingulate cortex, Brodmann area 46, Brodmann area 9, CA3 field, cingulate gyrus, corneal stroma, dentate gyrus of hippocampal formation granule cell, dorsolateral prefrontal cortex, frontal pole, genital tubercle, granulocyte, parietal lobe, postcentral gyrus, prefrontal cortex, primary motor cortex, primary visual cortex, superior frontal gyrus, visual cortex. Use these groups to spot repeated connection types before inspecting the individual relationships.

LMO4

Top relations

Gene ontology · 22
LMO4 → cell leading edge, cis-regulatory region sequence-specific DNA binding, DNA-binding transcription factor activity, metal ion binding, negative regulation of protein-containing complex assembly, neural tube closure, positive regulation of kinase activity, positive regulation of transcription by RNA polymerase II, protein binding, regulation of cell activation, regulation of cell fate specification, regulation of cell migration, regulation of transcription, DNA-templated, spinal cord association neuron differentiation, spinal cord motor neuron differentiation, thymus development, transcription by RNA polymerase II, transcription factor binding, transcription regulator complex, transcription, DNA-templated
Bgee · 18
LMO4 → anterior cingulate cortex, Brodmann area 46, Brodmann area 9, CA3 field, cingulate gyrus, corneal stroma, dentate gyrus of hippocampal formation granule cell, dorsolateral prefrontal cortex, frontal pole, genital tubercle, granulocyte, parietal lobe, postcentral gyrus, prefrontal cortex, primary motor cortex, primary visual cortex, superior frontal gyrus, visual cortex
RNA expression pattern · 18
LMO4 → anterior cingulate cortex, Brodmann area 46, Brodmann area 9, CA3 field, cingulate gyrus, corneal stroma, dentate gyrus of hippocampal formation granule cell, dorsolateral prefrontal cortex, frontal pole, genital tubercle, granulocyte, parietal lobe, postcentral gyrus, prefrontal cortex, primary motor cortex, primary visual cortex, superior frontal gyrus, visual cortex
related to Interactions · 3
LMO4 → BRCA1, LDB1, RBBP8
Band · 2
LMO4 → 1p22.3, 3 H2|3 68.61 cM
Chr. · 2
LMO4 → Chromosome 1 (human), Chromosome 3 (mouse)
End · 2
LMO4 → 143,910,981 bp, 87,348,923 bp
related to Clinical significance · 2
LMO4 → It, Studies
Aliases · 1
LMO4 → LMO4, LIM domain only 4
Available structures · 1
LMO4 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2L4Z

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

bp chr human band gene protein chromosome lim domain region gc-rich location 5' mrna mouse transcription factor regulator search 348

LMO4 relationships Subject–Predicate–Object triples

TTTA extracted 87 structured relationships around LMO4. Examples in this analysis include LMO4 → Aliases → LMO4, LIM domain only 4 and LMO4 → Available structures → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2L4Z. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
LMO4AliasesLMO4, LIM domain only 41.00infobox
LMO4Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2L4Z1.00infobox
LMO4Band1p22.31.00infobox
LMO4Band3 H2|3 68.61 cM1.00infobox
LMO4Bgeedorsolateral prefrontal cortex1.00infobox
LMO4Bgeeprefrontal cortex1.00infobox
LMO4BgeeBrodmann area 461.00infobox
LMO4Bgeesuperior frontal gyrus1.00infobox
LMO4Bgeeparietal lobe1.00infobox
LMO4Bgeepostcentral gyrus1.00infobox
LMO4BgeeBrodmann area 91.00infobox
LMO4Bgeefrontal pole1.00infobox
LMO4Bgeecingulate gyrus1.00infobox
LMO4Bgeeanterior cingulate cortex1.00infobox
LMO4Bgeegranulocyte1.00infobox
LMO4Bgeegenital tubercle1.00infobox
LMO4Bgeevisual cortex1.00infobox
LMO4Bgeeprimary motor cortex1.00infobox
LMO4Bgeeprimary visual cortex1.00infobox
LMO4Bgeedentate gyrus of hippocampal formation granule cell1.00infobox
LMO4BgeeCA3 field1.00infobox
LMO4Bgeecorneal stroma1.00infobox
LMO4BioGPSMore reference expression data1.00infobox
LMO4Chr.Chromosome 1 (human)1.00infobox
LMO4Chr.Chromosome 3 (mouse)1.00infobox
LMO4DatabasesNCBI: entry; OMA: entry1.00infobox
LMO4End87,348,923 bp1.00infobox
LMO4End143,910,981 bp1.00infobox
LMO4EnsemblENSG000001430131.00infobox
LMO4Entrez85431.00infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around LMO4 bring nearby vocabulary together. In this analysis, examples include Cancer, Cell and Differentiation. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • gene
    • Location
    • Chromosome
    • Human
    • Bp
    • Chr
    • End
    • H2
    • Lmo4
    • Mouse
    • Search
    • Transcription
    • Lim
  • protein
    • Regulator
    • Transcription
    • Cysteine-rich
    • Domain-containing
    • Two
    • Breast
    • Cancer
    • Cell
    • Differentiation
    • End
    • H2
    • Mouse
  • LMO4
    • Cancer
    • Cell
    • Differentiation
    • Search
    • Shown
    • Transcription
    • Location
    • Protein
    • Chromosome
    • Human
    • Bp
    • Chr
  • lmo4
    • Cancer
    • Cell
    • Differentiation
    • Search
    • Shown
    • Transcription
    • Location
    • Protein
    • Chromosome
    • Human
    • Bp
    • Chr
  • mrna
    • Region
    • Breast
    • Cancer
    • Cell
    • Differentiation
    • End
    • H2
    • Mouse
    • Primary
    • Regulator
    • Search
    • Transcription
  • gc-rich
    • 5'
    • Region
    • Mrna

Connections between topic areas Semantic bridges

For LMO4, one of the stronger structural bridges in this analysis connects LMO4 with Overview. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
LMO4Overview · splits 6 ⟂ 5
LMO4Interactions · splits 6 ⟂ 5

Map overview Semantic statistics

LMO4

Nodes11
Edges10
Triples87
Avg. degree1.82
Density0.181818
Components1

Source & methodology

TTTA analyzes the structure around LMO4 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Regions, Interactions & Overview, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — LMO4 · EN edition · Analysis: TopicsToTalkAbout

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