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R.EcoRII

EcoRII (pronounced 'eco R two') is an Restriction endonuclease enzyme (REase) of the restriction modification system (RM) naturally found in Escherichia coli, a Gram-negative bacteria. Its molecular mass is 45.2 kDa, being composed of 402 amino acids.

Structure, Mode of action & Autoinhibition/activation mechanism

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Key facts & relationships

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AlphaFold
IPR015300 · PF09217
Available protein structures:
IPR015300 · PF09217
InterPro
IPR015300
PDB
IPR015300 PF09217 (ECOD; PDBsum)
Pfam
PF09217
Pfam clan
CL0405

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Overview

Mode of action

Structure

Autoinhibition/activation mechanism

Advanced semantic analysis

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Map overview Semantic statistics

R.EcoRII

Nodes44
Edges43
Triples10
Avg. degree1.95
Density0.045455
Components1

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R.EcoRII

Top relations

AlphaFold · 2
R.EcoRII → IPR015300, PF09217
Available protein structures: · 2
R.EcoRII → IPR015300, PF09217
InterPro · 1
R.EcoRII → IPR015300
PDB · 1
R.EcoRII → IPR015300 PF09217 (ECOD; PDBsum)
Pfam · 1
R.EcoRII → PF09217
Pfam clan · 1
R.EcoRII → CL0405
SCOP2 · 1
R.EcoRII → 1na6 / SCOPe / SUPFAM
Symbol · 1
R.EcoRII → EcoRII-N

Important terminology Word statistics

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Important terminology

ecorii domain restriction enzyme dna structure endonuclease pdb escherichia coli n-terminal catalytic rease 1na6 sequence another nuclease crystal mutant effector-binding

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
R.EcoRIIAlphaFoldIPR0153001.00infobox
R.EcoRIIAlphaFoldPF092171.00infobox
R.EcoRIIAvailable protein structures:IPR0153001.00infobox
R.EcoRIIAvailable protein structures:PF092171.00infobox
R.EcoRIIInterProIPR0153001.00infobox
R.EcoRIIPDBIPR015300 PF09217 (ECOD; PDBsum)1.00infobox
R.EcoRIIPfamPF092171.00infobox
R.EcoRIIPfam clanCL04051.00infobox
R.EcoRIISCOP21na6 / SCOPe / SUPFAM1.00infobox
R.EcoRIISymbolEcoRII-N1.00infobox

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