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EBF1

Transcription factor COE1 is a protein that in humans is encoded by the EBF1 gene. EBF1 stands for Early B-Cell Factor 1.

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Aliases
EBF1, COE1, EBF, O/E-1, OLF1, early B-cell factor 1, early B cell factor 1, EBF transcription factor 1
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3LYR, 3MQI
Band
5q33.3 · 11 B1.1|11 26.45 cM
Bgee
synovial joint · synovial membrane · Achilles tendon · oocyte · buccal mucosa cell
BioGPS
n/a
Chr.
Chromosome 5 (human) · Chromosome 11 (mouse)

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Map overview Semantic statistics

EBF1

Nodes12
Edges11
Triples78
Avg. degree1.83
Density0.166667
Components1

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EBF1

Top relations

Bgee · 19
EBF1 → Achilles tendon, ankle, brown adipose tissue, buccal mucosa cell, cardiac muscle tissue of right atrium, external carotid artery, internal carotid artery, lumbar spinal ganglion, neural tube, oocyte, parietal pleura, skin of hip, spinal ganglia, subcutaneous adipose tissue, superior cervical ganglion, synovial joint, synovial membrane, trigeminal ganglion, vena cava
RNA expression pattern · 19
EBF1 → Achilles tendon, ankle, brown adipose tissue, buccal mucosa cell, cardiac muscle tissue of right atrium, external carotid artery, internal carotid artery, lumbar spinal ganglion, neural tube, oocyte, parietal pleura, skin of hip, spinal ganglia, subcutaneous adipose tissue, superior cervical ganglion, synovial joint, synovial membrane, trigeminal ganglion, vena cava
Gene ontology · 14
EBF1 → C2H2 zinc finger domain binding, DNA binding, DNA-binding transcription activator activity, RNA polymerase II-specific, DNA-binding transcription factor activity, DNA-binding transcription factor activity, RNA polymerase II-specific, metal ion binding, multicellular organism development, nucleus, positive regulation of transcription by RNA polymerase II, protein binding, protein dimerization activity, regulation of transcription by RNA polymerase II, regulation of transcription, DNA-templated, transcription, DNA-templated
Band · 2
EBF1 → 11 B1.1|11 26.45 cM, 5q33.3
Chr. · 2
EBF1 → Chromosome 11 (mouse), Chromosome 5 (human)
End · 2
EBF1 → 159,099,916 bp, 45,008,091 bp
related to Interactions · 2
EBF1 → CREB, ZNF423
Aliases · 1
EBF1 → EBF1, COE1, EBF, O/E-1, OLF1, early B-cell factor 1, early B cell factor 1, EBF transcription factor 1
Available structures · 1
EBF1 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3LYR, 3MQI
BioGPS · 1
EBF1 → n/a

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Important terminology

factor bp chr human band gene chromosome expression transcription cell protein external location differentiation role mouse coe1 early b-cell function

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
EBF1AliasesEBF1, COE1, EBF, O/E-1, OLF1, early B-cell factor 1, early B cell factor 1, EBF transcription factor 11.00infobox
EBF1Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3LYR, 3MQI1.00infobox
EBF1Band5q33.31.00infobox
EBF1Band11 B1.1|11 26.45 cM1.00infobox
EBF1Bgeesynovial joint1.00infobox
EBF1Bgeesynovial membrane1.00infobox
EBF1BgeeAchilles tendon1.00infobox
EBF1Bgeeoocyte1.00infobox
EBF1Bgeebuccal mucosa cell1.00infobox
EBF1Bgeeskin of hip1.00infobox
EBF1Bgeecardiac muscle tissue of right atrium1.00infobox
EBF1Bgeeparietal pleura1.00infobox
EBF1Bgeevena cava1.00infobox
EBF1Bgeespinal ganglia1.00infobox
EBF1Bgeeexternal carotid artery1.00infobox
EBF1Bgeeinternal carotid artery1.00infobox
EBF1Bgeetrigeminal ganglion1.00infobox
EBF1Bgeesuperior cervical ganglion1.00infobox
EBF1Bgeeneural tube1.00infobox
EBF1Bgeeankle1.00infobox
EBF1Bgeelumbar spinal ganglion1.00infobox
EBF1Bgeesubcutaneous adipose tissue1.00infobox
EBF1Bgeebrown adipose tissue1.00infobox
EBF1BioGPSn/a1.00infobox
EBF1Chr.Chromosome 5 (human)1.00infobox
EBF1Chr.Chromosome 11 (mouse)1.00infobox
EBF1DatabasesNCBI: entry; OMA: entry1.00infobox
EBF1End159,099,916 bp1.00infobox
EBF1End45,008,091 bp1.00infobox
EBF1EnsemblENSG000001643301.00infobox

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