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CALCOCO2: Overview, Related Topics & Entities

Calcium-binding and coiled-coil domain-containing protein 2 is a protein that in humans is encoded by the CALCOCO2 gene.

Language: English [EN]
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CALCOCO2 topic overview

The analysis highlights Overview, Related Topics and Entities as prominent areas in the source structure around CALCOCO2.

Related topics
9
Source areas
1
Connected nodes
10
Extracted relationships
59
Concept neighborhoods
9
Bridge connections
10

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Overview · 9 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases
CALCOCO2, NDP52, calcium binding and coiled-coil domain 2
Available structures
Available structuresPDBHuman UniProt search: PDBe RCSB List of PDB id codes3VVV, 3VVW, 4GXL, 4HAN, 2MXP, 4XKL
Band
17q21.32
Bgee
Achilles tendon · gastric mucosa · right lung · epithelium of colon · sural nerve
BioGPS
More reference expression data
Chr.
Chromosome 17 (human)

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How CALCOCO2 connects Entity context

The extracted context around CALCOCO2 shows recurring relationship patterns in the source. For example, CALCOCO2 → autophagosome, autophagosome membrane, autophagy, cytoplasm, cytoplasmic vesicle, cytoskeleton, cytosol, intracellular membrane-bounded organelle, membrane, nucleus, perinuclear region of cytoplasm, positive regulation of autophagosome maturation, protein binding, protein homodimerization activity, response to interferon-gamma, viral process, xenophagy Another extracted example is CALCOCO2 → Achilles tendon, epithelium of colon, gastric mucosa, left testis, popliteal artery, rectum, right lung, right testis, sural nerve, tibial arteries. Use these groups to spot repeated connection types before inspecting the individual relationships.

CALCOCO2

Top relations

Gene ontology · 17
CALCOCO2 → autophagosome, autophagosome membrane, autophagy, cytoplasm, cytoplasmic vesicle, cytoskeleton, cytosol, intracellular membrane-bounded organelle, membrane, nucleus, perinuclear region of cytoplasm, positive regulation of autophagosome maturation, protein binding, protein homodimerization activity, response to interferon-gamma, viral process, xenophagy
Bgee · 10
CALCOCO2 → Achilles tendon, epithelium of colon, gastric mucosa, left testis, popliteal artery, rectum, right lung, right testis, sural nerve, tibial arteries
RNA expression pattern · 10
CALCOCO2 → Achilles tendon, epithelium of colon, gastric mucosa, left testis, popliteal artery, rectum, right lung, right testis, sural nerve, tibial arteries
Aliases · 1
CALCOCO2 → CALCOCO2, NDP52, calcium binding and coiled-coil domain 2
Available structures · 1
CALCOCO2 → Available structuresPDBHuman UniProt search: PDBe RCSB List of PDB id codes3VVV, 3VVW, 4GXL, 4HAN, 2MXP, 4XKL
Band · 1
CALCOCO2 → 17q21.32
BioGPS · 1
CALCOCO2 → More reference expression data
Chr. · 1
CALCOCO2 → Chromosome 17 (human)
Databases · 1
CALCOCO2 → NCBI: entry; OMA: entry
End · 1
CALCOCO2 → 48,866,522 bp

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

gene human protein nuclear nd10 nucleus bp chr chromosome 17 autophagy location encoded bodies linked uniprot band ucsc coiled-coil domain

CALCOCO2 relationships Subject–Predicate–Object triples

TTTA extracted 59 structured relationships around CALCOCO2. Examples in this analysis include CALCOCO2 → Aliases → CALCOCO2, NDP52, calcium binding and coiled-coil domain 2 and CALCOCO2 → Available structures → Available structuresPDBHuman UniProt search: PDBe RCSB List of PDB id codes3VVV, 3VVW, 4GXL, 4HAN, 2MXP, 4XKL. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
CALCOCO2AliasesCALCOCO2, NDP52, calcium binding and coiled-coil domain 21.00infobox
CALCOCO2Available structuresAvailable structuresPDBHuman UniProt search: PDBe RCSB List of PDB id codes3VVV, 3VVW, 4GXL, 4HAN, 2MXP, 4XKL1.00infobox
CALCOCO2Band17q21.321.00infobox
CALCOCO2BgeeAchilles tendon1.00infobox
CALCOCO2Bgeegastric mucosa1.00infobox
CALCOCO2Bgeeright lung1.00infobox
CALCOCO2Bgeeepithelium of colon1.00infobox
CALCOCO2Bgeesural nerve1.00infobox
CALCOCO2Bgeeleft testis1.00infobox
CALCOCO2Bgeeright testis1.00infobox
CALCOCO2Bgeerectum1.00infobox
CALCOCO2Bgeepopliteal artery1.00infobox
CALCOCO2Bgeetibial arteries1.00infobox
CALCOCO2BioGPSMore reference expression data1.00infobox
CALCOCO2Chr.Chromosome 17 (human)1.00infobox
CALCOCO2DatabasesNCBI: entry; OMA: entry1.00infobox
CALCOCO2End48,866,522 bp1.00infobox
CALCOCO2EnsemblENSG000001364361.00infobox
CALCOCO2Entrez102411.00infobox
CALCOCO2External IDsOMIM: 604587; GeneCards: CALCOCO21.00infobox
CALCOCO2Gene location (Human)Gene location (Human)Chr.Chromosome 17 (human)Band17q21.32Start48,831,018 bpEnd48,866,522 bp1.00infobox
CALCOCO2Gene ontologyprotein binding1.00infobox
CALCOCO2Gene ontologyprotein homodimerization activity1.00infobox
CALCOCO2Gene ontologycytoplasm1.00infobox
CALCOCO2Gene ontologyperinuclear region of cytoplasm1.00infobox
CALCOCO2Gene ontologyautophagosome1.00infobox
CALCOCO2Gene ontologyautophagosome membrane1.00infobox
CALCOCO2Gene ontologycytoskeleton1.00infobox
CALCOCO2Gene ontologymembrane1.00infobox
CALCOCO2Gene ontologycytoplasmic vesicle1.00infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around CALCOCO2 bring nearby vocabulary together. In this analysis, examples include Gene, Human and Location. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • CALCOCO2
    • Gene
    • Human
    • Location
    • Ucsc
    • Autophagy
    • Binding
    • Browser
    • Coiled-coil
    • Genome
    • Linked
    • Search
    • Uniprot
  • calcoco2
    • Gene
    • Human
    • Location
    • Ucsc
    • Autophagy
    • Binding
    • Browser
    • Coiled-coil
    • Genome
    • Linked
    • Search
    • Uniprot
  • gene
    • Human
    • Location
    • Protein
    • Ucsc
    • Binding
    • Browser
    • Domain
    • Genome
    • Search
    • Uniprot
    • Bp
    • Chr
  • protein
    • Subunit
    • Autophagy
    • Band
    • Binding
    • Bodies
    • Domain
    • Search
    • Uniprot
    • Viral
    • Bp
    • Chr
    • Chromosome
  • autophagy
    • Insulin
    • Band
    • Binding
    • Human
    • Linked
    • Search
    • Uniprot
    • Viral
    • Calcoco2
    • Bp
    • Chr
    • Chromosome
  • nuclear matrix
    • Bodies
    • Nd10
    • Appearing
    • Domains
    • Immunohistochemically
    • Nuclease
    • Subunit
    • Domain
    • Nucleus
    • Protein
  • hsv-1
    • Viral
    • Nd10
    • Nucleus
  • nuclease
    • Nuclear

Connections between topic areas Semantic bridges

Bridges highlight paths between different parts of the CALCOCO2 map and can reveal research angles that are easy to miss in a flat list.

Min side: 3

Map overview Semantic statistics

CALCOCO2

Nodes11
Edges10
Triples59
Avg. degree1.82
Density0.181818
Components1

Source & methodology

TTTA analyzes the structure around CALCOCO2 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Overview, Related Topics & Entities, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — CALCOCO2 · EN edition · Analysis: TopicsToTalkAbout

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