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CALCOCO2

Calcium-binding and coiled-coil domain-containing protein 2 is a protein that in humans is encoded by the CALCOCO2 gene.

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Aliases
CALCOCO2, NDP52, calcium binding and coiled-coil domain 2
Available structures
Available structuresPDBHuman UniProt search: PDBe RCSB List of PDB id codes3VVV, 3VVW, 4GXL, 4HAN, 2MXP, 4XKL
Band
17q21.32
Bgee
Achilles tendon · gastric mucosa · right lung · epithelium of colon · sural nerve
BioGPS
More reference expression data
Chr.
Chromosome 17 (human)

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CALCOCO2

Nodes11
Edges10
Triples59
Avg. degree1.82
Density0.181818
Components1

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CALCOCO2

Top relations

Gene ontology · 17
CALCOCO2 → autophagosome, autophagosome membrane, autophagy, cytoplasm, cytoplasmic vesicle, cytoskeleton, cytosol, intracellular membrane-bounded organelle, membrane, nucleus, perinuclear region of cytoplasm, positive regulation of autophagosome maturation, protein binding, protein homodimerization activity, response to interferon-gamma, viral process, xenophagy
Bgee · 10
CALCOCO2 → Achilles tendon, epithelium of colon, gastric mucosa, left testis, popliteal artery, rectum, right lung, right testis, sural nerve, tibial arteries
RNA expression pattern · 10
CALCOCO2 → Achilles tendon, epithelium of colon, gastric mucosa, left testis, popliteal artery, rectum, right lung, right testis, sural nerve, tibial arteries
Aliases · 1
CALCOCO2 → CALCOCO2, NDP52, calcium binding and coiled-coil domain 2
Available structures · 1
CALCOCO2 → Available structuresPDBHuman UniProt search: PDBe RCSB List of PDB id codes3VVV, 3VVW, 4GXL, 4HAN, 2MXP, 4XKL
Band · 1
CALCOCO2 → 17q21.32
BioGPS · 1
CALCOCO2 → More reference expression data
Chr. · 1
CALCOCO2 → Chromosome 17 (human)
Databases · 1
CALCOCO2 → NCBI: entry; OMA: entry
End · 1
CALCOCO2 → 48,866,522 bp

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Important terminology

gene human protein nuclear nd10 nucleus bp chr chromosome 17 autophagy location encoded bodies linked uniprot band ucsc coiled-coil domain

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
CALCOCO2AliasesCALCOCO2, NDP52, calcium binding and coiled-coil domain 21.00infobox
CALCOCO2Available structuresAvailable structuresPDBHuman UniProt search: PDBe RCSB List of PDB id codes3VVV, 3VVW, 4GXL, 4HAN, 2MXP, 4XKL1.00infobox
CALCOCO2Band17q21.321.00infobox
CALCOCO2BgeeAchilles tendon1.00infobox
CALCOCO2Bgeegastric mucosa1.00infobox
CALCOCO2Bgeeright lung1.00infobox
CALCOCO2Bgeeepithelium of colon1.00infobox
CALCOCO2Bgeesural nerve1.00infobox
CALCOCO2Bgeeleft testis1.00infobox
CALCOCO2Bgeeright testis1.00infobox
CALCOCO2Bgeerectum1.00infobox
CALCOCO2Bgeepopliteal artery1.00infobox
CALCOCO2Bgeetibial arteries1.00infobox
CALCOCO2BioGPSMore reference expression data1.00infobox
CALCOCO2Chr.Chromosome 17 (human)1.00infobox
CALCOCO2DatabasesNCBI: entry; OMA: entry1.00infobox
CALCOCO2End48,866,522 bp1.00infobox
CALCOCO2EnsemblENSG000001364361.00infobox
CALCOCO2Entrez102411.00infobox
CALCOCO2External IDsOMIM: 604587; GeneCards: CALCOCO21.00infobox
CALCOCO2Gene location (Human)Gene location (Human)Chr.Chromosome 17 (human)Band17q21.32Start48,831,018 bpEnd48,866,522 bp1.00infobox
CALCOCO2Gene ontologyprotein binding1.00infobox
CALCOCO2Gene ontologyprotein homodimerization activity1.00infobox
CALCOCO2Gene ontologycytoplasm1.00infobox
CALCOCO2Gene ontologyperinuclear region of cytoplasm1.00infobox
CALCOCO2Gene ontologyautophagosome1.00infobox
CALCOCO2Gene ontologyautophagosome membrane1.00infobox
CALCOCO2Gene ontologycytoskeleton1.00infobox
CALCOCO2Gene ontologymembrane1.00infobox
CALCOCO2Gene ontologycytoplasmic vesicle1.00infobox

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