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VPS25

Vacuolar protein-sorting-associated protein 25 is a protein that in humans is encoded by the VPS25 gene.

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Aliases
VPS25, DERP9, EAP20, FAP20, vacuolar protein sorting 25 homolog
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2ZME, 3CUQ, 3HTU
Band
17q21.2 · 11 D|11 64.48 cM
Bgee
mucosa of transverse colon · rectum · islet of Langerhans · skin of arm · right uterine tube
BioGPS
More reference expression data
Chr.
Chromosome 17 (human) · Chromosome 11 (mouse)

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Map overview Semantic statistics

VPS25

Nodes21
Edges20
Triples84
Avg. degree1.9
Density0.095238
Components1

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VPS25

Top relations

Gene ontology · 23
VPS25 → cytoplasm, cytosol, endosomal transport, endosome, endosome membrane, ESCRT II complex, extracellular exosome, macroautophagy, membrane, multivesicular body assembly, multivesicular body sorting pathway, negative regulation of epidermal growth factor-activated receptor activity, nucleoplasm, nucleus, protein binding, protein homodimerization activity, protein N-terminus binding, protein transport, protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway, regulation of transcription, DNA-templated
Bgee · 19
VPS25 → blastocyst, body of stomach, embryo, genital tubercle, granulocyte, islet of Langerhans, lip, mucosa of ileum, mucosa of transverse colon, muscle of thigh, olfactory zone of nasal mucosa, rectum, right kidney, right uterine tube, skin of arm, smooth muscle tissue, stromal cell of endometrium, tail of embryo, yolk sac
RNA expression pattern · 19
VPS25 → blastocyst, body of stomach, embryo, genital tubercle, granulocyte, islet of Langerhans, lip, mucosa of ileum, mucosa of transverse colon, muscle of thigh, olfactory zone of nasal mucosa, rectum, right kidney, right uterine tube, skin of arm, smooth muscle tissue, stromal cell of endometrium, tail of embryo, yolk sac
Band · 2
VPS25 → 11 D|11 64.48 cM, 17q21.2
Chr. · 2
VPS25 → Chromosome 11 (mouse), Chromosome 17 (human)
End · 2
VPS25 → 101,150,375 bp, 42,779,599 bp
Aliases · 1
VPS25 → VPS25, DERP9, EAP20, FAP20, vacuolar protein sorting 25 homolog
Available structures · 1
VPS25 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2ZME, 3CUQ, 3HTU
BioGPS · 1
VPS25 → More reference expression data
Databases · 1
VPS25 → NCBI: entry; OMA: entry

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Important terminology

protein escrt-ii complex sorting human bp endosomal chr band gene chromosome 17 transport ii ubiquitinated vps22 vps36 location complexes escrt-i

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
VPS25AliasesVPS25, DERP9, EAP20, FAP20, vacuolar protein sorting 25 homolog1.00infobox
VPS25Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2ZME, 3CUQ, 3HTU1.00infobox
VPS25Band17q21.21.00infobox
VPS25Band11 D|11 64.48 cM1.00infobox
VPS25Bgeemucosa of transverse colon1.00infobox
VPS25Bgeerectum1.00infobox
VPS25Bgeeislet of Langerhans1.00infobox
VPS25Bgeeskin of arm1.00infobox
VPS25Bgeeright uterine tube1.00infobox
VPS25Bgeemucosa of ileum1.00infobox
VPS25Bgeebody of stomach1.00infobox
VPS25Bgeesmooth muscle tissue1.00infobox
VPS25Bgeestromal cell of endometrium1.00infobox
VPS25Bgeeolfactory zone of nasal mucosa1.00infobox
VPS25Bgeeyolk sac1.00infobox
VPS25Bgeetail of embryo1.00infobox
VPS25Bgeegenital tubercle1.00infobox
VPS25Bgeeright kidney1.00infobox
VPS25Bgeelip1.00infobox
VPS25Bgeeembryo1.00infobox
VPS25Bgeegranulocyte1.00infobox
VPS25Bgeemuscle of thigh1.00infobox
VPS25Bgeeblastocyst1.00infobox
VPS25BioGPSMore reference expression data1.00infobox
VPS25Chr.Chromosome 17 (human)1.00infobox
VPS25Chr.Chromosome 11 (mouse)1.00infobox
VPS25DatabasesNCBI: entry; OMA: entry1.00infobox
VPS25End42,779,599 bp1.00infobox
VPS25End101,150,375 bp1.00infobox
VPS25EnsemblENSG000001314751.00infobox

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