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VPS36: Overview, Related Topics & Entities

Vacuolar protein-sorting-associated protein 36 is a protein that in humans is encoded by the VPS36 gene.

Language: English [EN]
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VPS36 topic overview

The analysis highlights Overview, Related Topics and Entities as prominent areas in the source structure around VPS36.

Related topics
2
Source areas
1
Connected nodes
3
Extracted relationships
87
Concept neighborhoods
4
Bridge connections
3

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Overview · 2 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases
VPS36, C13orf9, EAP45, CGI-145, vacuolar protein sorting 36 homolog
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2HTH, 2ZME, 3CUQ
Band
13q14.3 · 8|8 A2
Bgee
skin of arm · mucosa of ileum · skin of hip · skin of thigh · pancreatic epithelial cell
BioGPS
More reference expression data
Chr.
Chromosome 13 (human) · Chromosome 8 (mouse)

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How VPS36 connects Entity context

The extracted context around VPS36 shows recurring relationship patterns in the source. For example, VPS36 → cytoplasm, cytosol, endosomal transport, endosome, endosome transport via multivesicular body sorting pathway, ESCRT II complex, extracellular exosome, late endosome, late endosome membrane, lipid binding, lysosome, macroautophagy, membrane, multivesicular body assembly, nucleus, phosphatidylinositol-3-phosphate binding, protein binding, protein C-terminus binding, protein transport, protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway Another extracted example is VPS36 → endocardial cushion, endothelial cell, gingival epithelium, hair follicle, medullary collecting duct, mucosa of ileum, otic vesicle, pancreatic ductal cell, pancreatic epithelial cell, Paneth cell, skin of abdomen, skin of arm, skin of hip, skin of thigh, spermatid, tibialis anterior muscle, transitional epithelium of urinary bladder, trigeminal ganglion, ureter, urothelium. Use these groups to spot repeated connection types before inspecting the individual relationships.

VPS36

Top relations

Gene ontology · 24
VPS36 → cytoplasm, cytosol, endosomal transport, endosome, endosome transport via multivesicular body sorting pathway, ESCRT II complex, extracellular exosome, late endosome, late endosome membrane, lipid binding, lysosome, macroautophagy, membrane, multivesicular body assembly, nucleus, phosphatidylinositol-3-phosphate binding, protein binding, protein C-terminus binding, protein transport, protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
Bgee · 20
VPS36 → endocardial cushion, endothelial cell, gingival epithelium, hair follicle, medullary collecting duct, mucosa of ileum, otic vesicle, pancreatic ductal cell, pancreatic epithelial cell, Paneth cell, skin of abdomen, skin of arm, skin of hip, skin of thigh, spermatid, tibialis anterior muscle, transitional epithelium of urinary bladder, trigeminal ganglion, ureter, urothelium
RNA expression pattern · 20
VPS36 → endocardial cushion, endothelial cell, gingival epithelium, hair follicle, medullary collecting duct, mucosa of ileum, otic vesicle, pancreatic ductal cell, pancreatic epithelial cell, Paneth cell, skin of abdomen, skin of arm, skin of hip, skin of thigh, spermatid, tibialis anterior muscle, transitional epithelium of urinary bladder, trigeminal ganglion, ureter, urothelium
Band · 2
VPS36 → 13q14.3, 8|8 A2
Chr. · 2
VPS36 → Chromosome 13 (human), Chromosome 8 (mouse)
End · 2
VPS36 → 22,710,859 bp, 52,450,634 bp
Aliases · 1
VPS36 → VPS36, C13orf9, EAP45, CGI-145, vacuolar protein sorting 36 homolog
Available structures · 1
VPS36 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2HTH, 2ZME, 3CUQ
BioGPS · 1
VPS36 → More reference expression data
Databases · 1
VPS36 → NCBI: entry; OMA: entry

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

bp chr human band gene chromosome 13 protein location mouse vacuolar 36 sorting search 450 634 end 52 710 859

VPS36 relationships Subject–Predicate–Object triples

TTTA extracted 87 structured relationships around VPS36. Examples in this analysis include VPS36 → Aliases → VPS36, C13orf9, EAP45, CGI-145, vacuolar protein sorting 36 homolog and VPS36 → Available structures → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2HTH, 2ZME, 3CUQ. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
VPS36AliasesVPS36, C13orf9, EAP45, CGI-145, vacuolar protein sorting 36 homolog1.00infobox
VPS36Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2HTH, 2ZME, 3CUQ1.00infobox
VPS36Band13q14.31.00infobox
VPS36Band8|8 A21.00infobox
VPS36Bgeeskin of arm1.00infobox
VPS36Bgeemucosa of ileum1.00infobox
VPS36Bgeeskin of hip1.00infobox
VPS36Bgeeskin of thigh1.00infobox
VPS36Bgeepancreatic epithelial cell1.00infobox
VPS36Bgeepancreatic ductal cell1.00infobox
VPS36Bgeetibialis anterior muscle1.00infobox
VPS36Bgeeendothelial cell1.00infobox
VPS36Bgeeskin of abdomen1.00infobox
VPS36Bgeegingival epithelium1.00infobox
VPS36Bgeetrigeminal ganglion1.00infobox
VPS36Bgeeurothelium1.00infobox
VPS36Bgeetransitional epithelium of urinary bladder1.00infobox
VPS36BgeePaneth cell1.00infobox
VPS36Bgeehair follicle1.00infobox
VPS36Bgeeureter1.00infobox
VPS36Bgeemedullary collecting duct1.00infobox
VPS36Bgeeotic vesicle1.00infobox
VPS36Bgeeendocardial cushion1.00infobox
VPS36Bgeespermatid1.00infobox
VPS36BioGPSMore reference expression data1.00infobox
VPS36Chr.Chromosome 13 (human)1.00infobox
VPS36Chr.Chromosome 8 (mouse)1.00infobox
VPS36DatabasesNCBI: entry; OMA: entry1.00infobox
VPS36End52,450,634 bp1.00infobox
VPS36End22,710,859 bp1.00infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around VPS36 bring nearby vocabulary together. In this analysis, examples include Protein, Gene and Search. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • VPS36
    • Protein
    • Gene
    • Search
    • Sorting
    • Vacuolar
    • Location
    • Chromosome
    • Human
    • Bp
    • Chr
    • Encoded
    • Humans
  • vps36
    • Protein
    • Gene
    • Search
    • Sorting
    • Vacuolar
    • Location
    • Chromosome
    • Human
    • Bp
    • Chr
    • Encoded
    • Humans
  • protein
    • Vps36
    • Gene
    • Search
    • Sorting
    • Vacuolar
    • Location
    • Chromosome
    • Human
    • Bp
    • Chr
    • Encoded
    • Humans
  • gene
    • Location
    • Protein
    • Vps36
    • Chromosome
    • Human
    • Bp
    • Chr
    • End
    • Mouse
    • Search
    • Sorting
    • Vacuolar

Connections between topic areas Semantic bridges

Bridges highlight paths between different parts of the VPS36 map and can reveal research angles that are easy to miss in a flat list.

Min side: 3

Map overview Semantic statistics

VPS36

Nodes4
Edges3
Triples87
Avg. degree1.5
Density0.5
Components1

Source & methodology

TTTA analyzes the structure around VPS36 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Overview, Related Topics & Entities, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — VPS36 · EN edition · Analysis: TopicsToTalkAbout

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