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TRA2B

Transformer-2 protein homolog beta, also known as TRA2B previously known as splicing factor, arginine/serine-rich 10 (transformer 2 homolog, Drosophila) (SFRS10), is a protein that in humans is encoded by the TRA2B gene.

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2 related topics

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Aliases
TRA2B, Htra2-beta, PPP1R156, SFRS10, SRFS10, TRA2-BETA, TRAN2B, transformer 2 beta homolog (Drosophila), transformer 2 beta homolog
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2CQC, 2KXN, 2RRA, 2RRB
Band
3q27.2 · 16 B1|16 13.18 cM
Bgee
germinal epithelium · parietal pleura · ventricular zone · embryo · visceral pleura
BioGPS
More reference expression data
Chr.
Chromosome 3 (human) · Chromosome 16 (mouse)

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Map overview Semantic statistics

TRA2B

Nodes9
Edges8
Triples83
Avg. degree1.78
Density0.222222
Components1

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TRA2B

Top relations

Gene ontology · 25
TRA2B → cellular response to glucose stimulus, cerebral cortex regionalization, embryonic brain development, identical protein binding, mRNA binding, mRNA processing, mRNA splicing, via spliceosome, negative regulation of mRNA splicing, via spliceosome, nuclear inner membrane, nucleic acid binding, nucleoplasm, nucleus, poly-purine tract binding, positive regulation of mRNA splicing, via spliceosome, pre-mRNA binding, protein binding, protein complex oligomerization, protein domain specific binding, regulation of alternative mRNA splicing, via spliceosome, regulation of RNA splicing
Bgee · 17
TRA2B → amniotic fluid, blastocyst, embryo, endothelial cell, epithelium of nasopharynx, ganglionic eminence, genital tubercle, germinal epithelium, morula, neural layer of retina, parietal pleura, spermatocyte, tail of embryo, tibia, ventricular zone, visceral pleura, yolk sac
RNA expression pattern · 17
TRA2B → amniotic fluid, blastocyst, embryo, endothelial cell, epithelium of nasopharynx, ganglionic eminence, genital tubercle, germinal epithelium, morula, neural layer of retina, parietal pleura, spermatocyte, tail of embryo, tibia, ventricular zone, visceral pleura, yolk sac
Band · 2
TRA2B → 16 B1|16 13.18 cM, 3q27.2
Chr. · 2
TRA2B → Chromosome 16 (mouse), Chromosome 3 (human)
End · 2
TRA2B → 185,938,103 bp, 22,084,755 bp
Aliases · 1
TRA2B → TRA2B, Htra2-beta, PPP1R156, SFRS10, SRFS10, TRA2-BETA, TRAN2B, transformer 2 beta homolog (Drosophila), transformer 2 beta homolog
Available structures · 1
TRA2B → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2CQC, 2KXN, 2RRA, 2RRB
BioGPS · 1
TRA2B → More reference expression data
Databases · 1
TRA2B → NCBI: entry; OMA: entry

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Important terminology

bp chr human band gene protein chromosome location poison exon inclusion mouse homolog beta splicing transformer drosophila sfrs10 regulation cell

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
TRA2BAliasesTRA2B, Htra2-beta, PPP1R156, SFRS10, SRFS10, TRA2-BETA, TRAN2B, transformer 2 beta homolog (Drosophila), transformer 2 beta homolog1.00infobox
TRA2BAvailable structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2CQC, 2KXN, 2RRA, 2RRB1.00infobox
TRA2BBand3q27.21.00infobox
TRA2BBand16 B1|16 13.18 cM1.00infobox
TRA2BBgeegerminal epithelium1.00infobox
TRA2BBgeeparietal pleura1.00infobox
TRA2BBgeeventricular zone1.00infobox
TRA2BBgeeembryo1.00infobox
TRA2BBgeevisceral pleura1.00infobox
TRA2BBgeeendothelial cell1.00infobox
TRA2BBgeeganglionic eminence1.00infobox
TRA2BBgeeamniotic fluid1.00infobox
TRA2BBgeetibia1.00infobox
TRA2BBgeeepithelium of nasopharynx1.00infobox
TRA2BBgeetail of embryo1.00infobox
TRA2BBgeegenital tubercle1.00infobox
TRA2BBgeeyolk sac1.00infobox
TRA2BBgeespermatocyte1.00infobox
TRA2BBgeeneural layer of retina1.00infobox
TRA2BBgeemorula1.00infobox
TRA2BBgeeblastocyst1.00infobox
TRA2BBioGPSMore reference expression data1.00infobox
TRA2BChr.Chromosome 3 (human)1.00infobox
TRA2BChr.Chromosome 16 (mouse)1.00infobox
TRA2BDatabasesNCBI: entry; OMA: entry1.00infobox
TRA2BEnd185,938,103 bp1.00infobox
TRA2BEnd22,084,755 bp1.00infobox
TRA2BEnsemblENSG000001365271.00infobox
TRA2BEntrez64341.00infobox
TRA2BExternal IDsOMIM: 602719; MGI: 106016; GeneCards: TRA2B1.00infobox

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