Tapasin

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Explore the main themes, entities and connections around Tapasin. Start with the topic map, then use the sections below for research and deeper semantic analysis.

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Function

Glycoprotein MHC Class I Endoplasmic reticulum C-terminal

10 related topics

Interactions

Interact HLA-A TAP1

3 related topics

Overview

Protein Gene

2 related topics

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases: TAPBP, NGS17, TAPA, TPN, TPSN, TAP binding protein (tapasin), TAP binding protein
Available structures: Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3F8U
Band: 6p21.32 · 17 B1|17 17.98 cM
Bgee: bone marrow cell · granulocyte · blood · spleen · mucosa of transverse colon
BioGPS: More reference expression data
Chr.: Chromosome 6 (human) · Chromosome 17 (mouse)

Topics to explore

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Overview

Function

Glycoprotein
MHC Major histocompatibility complex
Class I MHC class I
Endoplasmic reticulum
C-terminal C-terminus
Antigen
Molecule
Peptide-loading complex Peptide loading complex
Calreticulin
Peptides

Interactions

Interact Protein-protein interaction
HLA-A
TAP1

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

Map overview Semantic statistics

Nodes19

Edges18

Triples113

Avg. degree1.89

Density0.105263

Components1

How this topic connects Entity context

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Tapasin

Top relations

Gene ontology · 31

Tapasin → ABC-type peptide antigen transporter activity, amide transport, antigen processing and presentation of endogenous peptide antigen via MHC class I, antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent, antigen processing and presentation of peptide antigen via MHC class I, endoplasmic reticulum, endoplasmic reticulum membrane, endoplasmic reticulum-Golgi intermediate compartment membrane, Golgi membrane, immune response, integral component of lumenal side of endoplasmic reticulum membrane, integral component of membrane, membrane, MHC class I peptide loading complex, MHC class I protein binding, MHC class Ib protein complex assembly, peptide antigen binding, peptide antigen stabilization, peptide transport, phagocytic vesicle membrane

Bgee · 18

Tapasin → appendix, blood, bone marrow cell, epithelium of colon, granulocyte, Ileal epithelium, lymph node, mesenteric lymph nodes, monocyte, mucosa of transverse colon, pituitary gland, right adrenal gland, right lung, right lung lobe, spleen, stroma of bone marrow, subcutaneous adipose tissue, submandibular gland

RNA expression pattern · 18

related to Function · 15

Tapasin → Alternative, Beta2, C-terminal, ER, ERp57, Following, In, It, KKKAE, MHC, TAP, The, The TAPBP, This, Up

related to External links · 6

Tapasin → Human Tapasin, Medicine Medical Subject Headings, MeSH, National Library, PDB, PDBe-KB

Band · 2

Tapasin → 17 B1|17 17.98 cM, 6p21.32

Chr. · 2

Tapasin → Chromosome 17 (mouse), Chromosome 6 (human)

End · 2

Tapasin → 33,314,254 bp, 34,148,266 bp

Aliases · 1

Tapasin → TAPBP, NGS17, TAPA, TPN, TPSN, TAP binding protein (tapasin), TAP binding protein

Available structures · 1

Tapasin → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3F8U

Important terminology Word statistics

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

mhc class bp gene human tap chr band chromosome tapbp complex protein also transporter endoplasmic reticulum loading location antigen molecules

Entity relationships Subject–Predicate–Object triples

Subject	Predicate	Object	Confidence	Src
Tapasin	Aliases	TAPBP, NGS17, TAPA, TPN, TPSN, TAP binding protein (tapasin), TAP binding protein	1.00	infobox
Tapasin	Available structures	Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3F8U	1.00	infobox
Tapasin	Band	6p21.32	1.00	infobox
Tapasin	Band	17 B1\|17 17.98 cM	1.00	infobox
Tapasin	Bgee	bone marrow cell	1.00	infobox
Tapasin	Bgee	granulocyte	1.00	infobox
Tapasin	Bgee	blood	1.00	infobox
Tapasin	Bgee	spleen	1.00	infobox
Tapasin	Bgee	mucosa of transverse colon	1.00	infobox
Tapasin	Bgee	monocyte	1.00	infobox
Tapasin	Bgee	appendix	1.00	infobox
Tapasin	Bgee	lymph node	1.00	infobox
Tapasin	Bgee	epithelium of colon	1.00	infobox
Tapasin	Bgee	right adrenal gland	1.00	infobox
Tapasin	Bgee	mesenteric lymph nodes	1.00	infobox
Tapasin	Bgee	Ileal epithelium	1.00	infobox
Tapasin	Bgee	subcutaneous adipose tissue	1.00	infobox
Tapasin	Bgee	stroma of bone marrow	1.00	infobox
Tapasin	Bgee	right lung	1.00	infobox
Tapasin	Bgee	right lung lobe	1.00	infobox
Tapasin	Bgee	pituitary gland	1.00	infobox
Tapasin	Bgee	submandibular gland	1.00	infobox
Tapasin	BioGPS	More reference expression data	1.00	infobox
Tapasin	Chr.	Chromosome 6 (human)	1.00	infobox
Tapasin	Chr.	Chromosome 17 (mouse)	1.00	infobox
Tapasin	Databases	NCBI: entry; OMA: entry	1.00	infobox
Tapasin	End	33,314,254 bp	1.00	infobox
Tapasin	End	34,148,266 bp	1.00	infobox
Tapasin	Ensembl	ENSG00000231925 ENSG00000236490 ENSG00000206281 ENSG00000206208 ENSG00000112493 n/a	1.00	infobox
Tapasin	Entrez	6892	1.00	infobox

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Connections between topic areas Semantic bridges

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