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TAF5

Transcription initiation factor TFIID subunit 5 is a protein that in humans is encoded by the TAF5 gene.

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Aliases
TAF5, TAF2D, TAFII100, TAF(II)100, TAFII-100, TATA-box binding protein associated factor 5
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2NXP
Band
10q24.33 · 19|19 C3
Bgee
secondary oocyte · gonad · testicle · amniotic fluid · ventricular zone
BioGPS
More reference expression data
Chr.
Chromosome 10 (human) · Chromosome 19 (mouse)

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Map overview Semantic statistics

TAF5

Nodes10
Edges9
Triples86
Avg. degree1.8
Density0.2
Components1

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TAF5

Top relations

Gene ontology · 22
TAF5 → actin cytoskeleton, chromatin organization, DNA-binding transcription factor activity, DNA-templated transcription, initiation, histone acetylation, histone acetyltransferase activity, identical protein binding, nucleolus, nucleoplasm, nucleus, protein binding, protein dimerization activity, regulation of signal transduction by p53 class mediator, regulation of transcription, DNA-templated, RNA polymerase II general transcription initiation factor activity, snRNA transcription by RNA polymerase II, transcription by RNA polymerase II, transcription factor TFIID complex, transcription factor TFTC complex, transcription initiation from RNA polymerase II promoter
Bgee · 19
TAF5 → amniotic fluid, Brodmann area 23, buccal mucosa cell, cumulus cell, embryo, ganglionic eminence, gonad, hand, medial ganglionic eminence, middle temporal gyrus, Paneth cell, primary oocyte, primitive streak, secondary oocyte, spermatid, tail of embryo, testicle, ventricular zone, zygote
RNA expression pattern · 19
TAF5 → amniotic fluid, Brodmann area 23, buccal mucosa cell, cumulus cell, embryo, ganglionic eminence, gonad, hand, medial ganglionic eminence, middle temporal gyrus, Paneth cell, primary oocyte, primitive streak, secondary oocyte, spermatid, tail of embryo, testicle, ventricular zone, zygote
related to Interactions · 3
TAF5 → TAF6, TAF9, TATA
Band · 2
TAF5 → 10q24.33, 19|19 C3
Chr. · 2
TAF5 → Chromosome 10 (human), Chromosome 19 (mouse)
End · 2
TAF5 → 103,389,065 bp, 47,071,918 bp
Aliases · 1
TAF5 → TAF5, TAF2D, TAFII100, TAF(II)100, TAFII-100, TATA-box binding protein associated factor 5
Available structures · 1
TAF5 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2NXP
BioGPS · 1
TAF5 → More reference expression data

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Important terminology

bp tfiid protein gene transcription chr human band factor initiation chromosome 10 complex subunit location function ii binding mouse polymerase

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
TAF5AliasesTAF5, TAF2D, TAFII100, TAF(II)100, TAFII-100, TATA-box binding protein associated factor 51.00infobox
TAF5Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2NXP1.00infobox
TAF5Band10q24.331.00infobox
TAF5Band19|19 C31.00infobox
TAF5Bgeesecondary oocyte1.00infobox
TAF5Bgeegonad1.00infobox
TAF5Bgeetesticle1.00infobox
TAF5Bgeeamniotic fluid1.00infobox
TAF5Bgeeventricular zone1.00infobox
TAF5Bgeeembryo1.00infobox
TAF5Bgeebuccal mucosa cell1.00infobox
TAF5Bgeeganglionic eminence1.00infobox
TAF5BgeeBrodmann area 231.00infobox
TAF5Bgeemiddle temporal gyrus1.00infobox
TAF5Bgeezygote1.00infobox
TAF5Bgeeprimary oocyte1.00infobox
TAF5Bgeemedial ganglionic eminence1.00infobox
TAF5Bgeehand1.00infobox
TAF5Bgeeprimitive streak1.00infobox
TAF5Bgeetail of embryo1.00infobox
TAF5BgeePaneth cell1.00infobox
TAF5Bgeespermatid1.00infobox
TAF5Bgeecumulus cell1.00infobox
TAF5BioGPSMore reference expression data1.00infobox
TAF5Chr.Chromosome 10 (human)1.00infobox
TAF5Chr.Chromosome 19 (mouse)1.00infobox
TAF5DatabasesNCBI: entry; OMA: entry1.00infobox
TAF5End103,389,065 bp1.00infobox
TAF5End47,071,918 bp1.00infobox
TAF5EnsemblENSG000001488351.00infobox

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