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TAF4: Regions & Measurement

Transcription initiation factor TFIID subunit 4 is a protein that in humans is encoded by the TAF4 gene.

Language: English [EN]
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TAF4 topic overview

The analysis highlights Regions and Measurement as prominent areas in the source structure around TAF4.

Related topics
20
Source areas
4
Connected nodes
24
Extracted relationships
105
Related term clusters
18
Bridge connections
24

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Protein domain · 11 topics
Function · 4 topics
Interactions · 3 topics
Overview · 2 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases
TAF4, TAF2C, TAF2C1, TAF4A, TAFII130, TAFII135, TATA-box binding protein associated factor 4, TAFII-135, TAFII-130, TAF(II)135, TAF(II)130
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1H3O, 2P6V
Band
20q13.33 · 2|2 H4
Bgee
right testis · left testis · skeletal muscle tissue · bone marrow cell · ventricular zone
BioGPS
More reference expression data
Chr.
Chromosome 20 (human) · Chromosome 2 (mouse)

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Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Function

Interactions

Protein domain

For the semantics nerds

You can skip this section if you’re here for content ideas and keyword inspiration.

Advanced semantic analysis

How TAF4 connects Entity context

The extracted context around TAF4 shows recurring relationship patterns in the source. For example, TAF4 → aryl hydrocarbon receptor binding, cytosol, DNA binding, DNA-binding transcription factor activity, DNA-templated transcription, initiation, MLL1 complex, nucleoplasm, nucleus, ovarian follicle development, positive regulation of transcription by RNA polymerase II, positive regulation of transcription, DNA-templated, protein binding, protein heterodimerization activity, protein-containing complex, regulation of signal transduction by p53 class mediator, regulation of transcription by RNA polymerase II, regulation of transcription, DNA-templated, RNA polymerase II general transcription initiation factor activity, RNA polymerase II preinitiation complex assembly, transcription by RNA polymerase II Another extracted example is TAF4 → bone marrow cell, cerebellar vermis, epiblast, ganglionic eminence, granulocyte, human fetus, left lung lobe, left ovary, left testis, lobe of cerebellum, neural layer of retina, ovary, primary oocyte, right hemisphere of cerebellum, right ovary, right testis, secondary oocyte, skeletal muscle tissue, ventricular zone, zygote. Use these groups to spot repeated connection types before inspecting the individual relationships.

TAF4

Top relations

Gene ontology · 27
TAF4 → aryl hydrocarbon receptor binding, cytosol, DNA binding, DNA-binding transcription factor activity, DNA-templated transcription, initiation, MLL1 complex, nucleoplasm, nucleus, ovarian follicle development, positive regulation of transcription by RNA polymerase II, positive regulation of transcription, DNA-templated, protein binding, protein heterodimerization activity, protein-containing complex, regulation of signal transduction by p53 class mediator, regulation of transcription by RNA polymerase II, regulation of transcription, DNA-templated, RNA polymerase II general transcription initiation factor activity, RNA polymerase II preinitiation complex assembly, transcription by RNA polymerase II
Bgee · 20
TAF4 → bone marrow cell, cerebellar vermis, epiblast, ganglionic eminence, granulocyte, human fetus, left lung lobe, left ovary, left testis, lobe of cerebellum, neural layer of retina, ovary, primary oocyte, right hemisphere of cerebellum, right ovary, right testis, secondary oocyte, skeletal muscle tissue, ventricular zone, zygote
RNA expression pattern · 20
TAF4 → bone marrow cell, cerebellar vermis, epiblast, ganglionic eminence, granulocyte, human fetus, left lung lobe, left ovary, left testis, lobe of cerebellum, neural layer of retina, ovary, primary oocyte, right hemisphere of cerebellum, right ovary, right testis, secondary oocyte, skeletal muscle tissue, ventricular zone, zygote
related to Protein domain · 13
TAF4 → C-terminal, CCTD, Drosophila, HFD, INTERPRO, TAFIIs, TATA, TBP-associated, TFIID, TFIID-specific, The C-terminal, Transcription, Yeast TFIID
Band · 2
TAF4 → 20q13.33, 2|2 H4
Chr. · 2
TAF4 → Chromosome 2 (mouse), Chromosome 20 (human)
End · 2
TAF4 → 179,618,439 bp, 62,065,881 bp
related to Interactions · 2
TAF4 → CBX5mTATA, SPT3
Aliases · 1
TAF4 → TAF4, TAF2C, TAF2C1, TAF4A, TAFII130, TAFII135, TATA-box binding protein associated factor 4, TAFII-135, TAFII-130, TAF(II)135, TAF(II)130
Available structures · 1
TAF4 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1H3O, 2P6V

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

protein transcription tfiid bp human factor gene initiation chr band binding chromosome 20 function location domain subunit ii mouse polymerase

TAF4 relationships Subject–Predicate–Object triples

TTTA extracted 105 structured relationships around TAF4. Examples in this analysis include TAF4 → Aliases → TAF4, TAF2C, TAF2C1, TAF4A, TAFII130, TAFII135, TATA-box binding protein associated factor 4, TAFII-135, TAFII-130, TAF(II)135, TAF(II)130 and TAF4 → Available structures → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1H3O, 2P6V. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
TAF4AliasesTAF4, TAF2C, TAF2C1, TAF4A, TAFII130, TAFII135, TATA-box binding protein associated factor 4, TAFII-135, TAFII-130, TAF(II)135, TAF(II)1301.00infobox
TAF4Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1H3O, 2P6V1.00infobox
TAF4Band20q13.331.00infobox
TAF4Band2|2 H41.00infobox
TAF4Bgeeright testis1.00infobox
TAF4Bgeeleft testis1.00infobox
TAF4Bgeeskeletal muscle tissue1.00infobox
TAF4Bgeebone marrow cell1.00infobox
TAF4Bgeeventricular zone1.00infobox
TAF4Bgeeovary1.00infobox
TAF4Bgeeleft ovary1.00infobox
TAF4Bgeeganglionic eminence1.00infobox
TAF4Bgeeright ovary1.00infobox
TAF4Bgeeright hemisphere of cerebellum1.00infobox
TAF4Bgeesecondary oocyte1.00infobox
TAF4Bgeezygote1.00infobox
TAF4Bgeeprimary oocyte1.00infobox
TAF4Bgeegranulocyte1.00infobox
TAF4Bgeeneural layer of retina1.00infobox
TAF4Bgeelobe of cerebellum1.00infobox
TAF4Bgeecerebellar vermis1.00infobox
TAF4Bgeehuman fetus1.00infobox
TAF4Bgeeleft lung lobe1.00infobox
TAF4Bgeeepiblast1.00infobox
TAF4BioGPSMore reference expression data1.00infobox
TAF4Chr.Chromosome 20 (human)1.00infobox
TAF4Chr.Chromosome 2 (mouse)1.00infobox
TAF4DatabasesNCBI: entry; OMA: entry1.00infobox
TAF4End62,065,881 bp1.00infobox
TAF4End179,618,439 bp1.00infobox

Related concept clusters Related term clusters

The concept neighborhoods around TAF4 bring nearby vocabulary together. In this analysis, examples include Transcription, Binding and Gene. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • TAF4
    • Transcription
    • Binding
    • Gene
    • Human
    • Component
    • Ii
    • Search
    • Tfiid
    • Location
    • Region
    • Chromosome
    • Function
  • taf4
    • Transcription
    • Binding
    • Gene
    • Human
    • Component
    • Ii
    • Search
    • Tfiid
    • Location
    • Region
    • Chromosome
    • Function
  • protein
    • Tfiid
    • Binding
    • Taf4
    • Transcription
    • Gene
    • Ii
    • Polymerase
    • Search
    • Assembly
    • Complex
    • Factors
    • Location
  • gene
    • Location
    • Chromosome
    • Bp
    • Chr
    • Human
    • End
    • Ii
    • Mouse
    • Search
    • Taf4
    • Protein
    • Tfiid
  • tfiid
    • Protein
    • Transcription
    • Gene
    • Taf4
    • Component
    • Polymerase
    • Assembly
    • Complex
    • Factors
    • Promoter
    • Binding
    • Rna
  • tata-binding protein (tbp)
    • Tfiid
    • Binding
    • Taf4
    • Transcription
    • Gene
    • Ii
    • Polymerase
    • Search
    • Assembly
    • Complex
    • Factors
    • Location
  • transcription initiation protein spt3 homolog
    • Initiation
    • Transcription
    • Factor
    • Taf4
    • Tfiid
    • Binding
    • Assembly
    • Complex
    • Promoter
    • Component
    • General
    • Protein
  • binding
    • Protein
    • Ii
    • Search
    • Taf4
    • Location
    • Chromosome
    • Function
    • Bp
    • Chr
    • Gene
    • Human
    • Initiation

Connections between topic areas Semantic bridges

For TAF4, one of the stronger structural bridges in this analysis connects TAF4 with Protein domain. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
TAF4 — Protein domain · splits 13 ⟂ 12
TAF4 — Function · splits 20 ⟂ 5
TAF4 — Interactions · splits 21 ⟂ 4
TAF4 — Overview · splits 22 ⟂ 3

Map overview Semantic statistics

TAF4

Nodes25
Edges24
Triples105
Avg. degree1.92
Density0.08
Components1

Source & methodology

TTTA analyzes the structure around TAF4 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Regions & Measurement, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — TAF4 · EN edition · Analysis: TopicsToTalkAbout

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