TAF4

Use the mouse wheel or two fingers (on touchscreens) to zoom in and out of the map.

Export map as:

Research this topic

Explore the main themes, entities and connections around TAF4. Start with the topic map, then use the sections below for research and deeper semantic analysis.

Explore this topic

Start with a few of the strongest sections from the source topic. These are research directions, not a list of keywords you must use.

Protein domain

Yeast Binding Domain C-terminal Yeast

11 related topics

Function

RNA polymerase II TFIID TATA-binding protein (TBP)Polyglutamine regions

4 related topics

Interactions

Interact CBX5m Transcription initiation protein SPT3 homolog

3 related topics

Overview

Protein Gene

2 related topics

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases: TAF4, TAF2C, TAF2C1, TAF4A, TAFII130, TAFII135, TATA-box binding protein associated factor 4, TAFII-135, TAFII-130, TAF(II)135, TAF(II)130
Available structures: Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1H3O, 2P6V
Band: 20q13.33 · 2|2 H4
Bgee: right testis · left testis · skeletal muscle tissue · bone marrow cell · ventricular zone
BioGPS: More reference expression data
Chr.: Chromosome 20 (human) · Chromosome 2 (mouse)

Topics to explore

Browse the full topic structure. Each item opens a new analysis centered on that subject.

Overview

Function

RNA polymerase II
TFIID
TATA-binding protein (TBP) TATA binding protein
Polyglutamine regions Polyglutamine tract

Interactions

Interact Protein-protein interaction
CBX5m CBX5 (gene)
Transcription initiation protein SPT3 homolog

Protein domain

Yeast Saccharomyces cerevisiae
Binding Binding (molecular)
Domain Protein domain
C-terminal
Yeast
Sequence Sequence (biology)
Drosophila
Human Homo sapiens
Conserved Conserved sequence
Transcription Transcription (genetics)
Initiation factor Eukaryotic initiation factor

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

Map overview Semantic statistics

Nodes25

Edges24

Triples106

Avg. degree1.92

Density0.08

Components1

How this topic connects Entity context

See the strongest relationship patterns around the current topic before diving into the raw triples.

TAF4

Top relations

Gene ontology · 27

TAF4 → aryl hydrocarbon receptor binding, cytosol, DNA binding, DNA-binding transcription factor activity, DNA-templated transcription, initiation, MLL1 complex, nucleoplasm, nucleus, ovarian follicle development, positive regulation of transcription by RNA polymerase II, positive regulation of transcription, DNA-templated, protein binding, protein heterodimerization activity, protein-containing complex, regulation of signal transduction by p53 class mediator, regulation of transcription by RNA polymerase II, regulation of transcription, DNA-templated, RNA polymerase II general transcription initiation factor activity, RNA polymerase II preinitiation complex assembly, transcription by RNA polymerase II

Bgee · 20

TAF4 → bone marrow cell, cerebellar vermis, epiblast, ganglionic eminence, granulocyte, human fetus, left lung lobe, left ovary, left testis, lobe of cerebellum, neural layer of retina, ovary, primary oocyte, right hemisphere of cerebellum, right ovary, right testis, secondary oocyte, skeletal muscle tissue, ventricular zone, zygote

RNA expression pattern · 20

related to Protein domain · 14

TAF4 → C-terminal, CCTD, Drosophila, HFD, INTERPRO, TAFIIs, TATA, TBP-associated, TFIID, TFIID-specific, The C-terminal, This, Transcription, Yeast TFIID

Band · 2

TAF4 → 20q13.33, 2|2 H4

Chr. · 2

TAF4 → Chromosome 2 (mouse), Chromosome 20 (human)

End · 2

TAF4 → 179,618,439 bp, 62,065,881 bp

related to Interactions · 2

TAF4 → CBX5mTATA, SPT3

Aliases · 1

TAF4 → TAF4, TAF2C, TAF2C1, TAF4A, TAFII130, TAFII135, TATA-box binding protein associated factor 4, TAFII-135, TAFII-130, TAF(II)135, TAF(II)130

Available structures · 1

TAF4 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1H3O, 2P6V

Important terminology Word statistics

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

protein transcription tfiid bp human factor gene initiation chr band binding chromosome 20 function location domain subunit ii mouse polymerase

Entity relationships Subject–Predicate–Object triples

Subject	Predicate	Object	Confidence	Src
TAF4	Aliases	TAF4, TAF2C, TAF2C1, TAF4A, TAFII130, TAFII135, TATA-box binding protein associated factor 4, TAFII-135, TAFII-130, TAF(II)135, TAF(II)130	1.00	infobox
TAF4	Available structures	Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1H3O, 2P6V	1.00	infobox
TAF4	Band	20q13.33	1.00	infobox
TAF4	Band	2\|2 H4	1.00	infobox
TAF4	Bgee	right testis	1.00	infobox
TAF4	Bgee	left testis	1.00	infobox
TAF4	Bgee	skeletal muscle tissue	1.00	infobox
TAF4	Bgee	bone marrow cell	1.00	infobox
TAF4	Bgee	ventricular zone	1.00	infobox
TAF4	Bgee	ovary	1.00	infobox
TAF4	Bgee	left ovary	1.00	infobox
TAF4	Bgee	ganglionic eminence	1.00	infobox
TAF4	Bgee	right ovary	1.00	infobox
TAF4	Bgee	right hemisphere of cerebellum	1.00	infobox
TAF4	Bgee	secondary oocyte	1.00	infobox
TAF4	Bgee	zygote	1.00	infobox
TAF4	Bgee	primary oocyte	1.00	infobox
TAF4	Bgee	granulocyte	1.00	infobox
TAF4	Bgee	neural layer of retina	1.00	infobox
TAF4	Bgee	lobe of cerebellum	1.00	infobox
TAF4	Bgee	cerebellar vermis	1.00	infobox
TAF4	Bgee	human fetus	1.00	infobox
TAF4	Bgee	left lung lobe	1.00	infobox
TAF4	Bgee	epiblast	1.00	infobox
TAF4	BioGPS	More reference expression data	1.00	infobox
TAF4	Chr.	Chromosome 20 (human)	1.00	infobox
TAF4	Chr.	Chromosome 2 (mouse)	1.00	infobox
TAF4	Databases	NCBI: entry; OMA: entry	1.00	infobox
TAF4	End	62,065,881 bp	1.00	infobox
TAF4	End	179,618,439 bp	1.00	infobox

Related concept clusters Concept neighborhoods

These clusters group vocabulary that occurs around closely connected concepts in the source material.

Connections between topic areas Semantic bridges

Bridges can reveal useful research angles that are easy to miss in a flat list of related terms.

Min side: 3