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SF3B3

Splicing factor 3B subunit 3 is a protein that in humans is encoded by the SF3B3 gene.

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Aliases
SF3B3, RSE1, SAP130, SF3b130, STAF130, splicing factor 3b subunit 3
Band
16q22.1 · 8 E1|8 57.73 cM
Bgee
ventricular zone · ganglionic eminence · stromal cell of endometrium · left ovary · right ovary
BioGPS
More reference expression data
Chr.
Chromosome 16 (human) · Chromosome 8 (mouse)
Databases
NCBI: entry; OMA: entry

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Overview

Interactions

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Map overview Semantic statistics

SF3B3

Nodes12
Edges11
Triples80
Avg. degree1.83
Density0.166667
Components1

How this topic connects Entity context

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SF3B3

Top relations

Bgee · 19
SF3B3 → body of uterus, canal of the cervix, dermis, ectocervix, endocardial cushion, epiblast, ganglionic eminence, human fetus, left ovary, mandibular prominence, maxillary prominence, primitive streak, right ovary, skin of abdomen, skin of leg, somite, stromal cell of endometrium, tail of embryo, ventricular zone
RNA expression pattern · 19
SF3B3 → body of uterus, canal of the cervix, dermis, ectocervix, endocardial cushion, epiblast, ganglionic eminence, human fetus, left ovary, mandibular prominence, maxillary prominence, primitive streak, right ovary, skin of abdomen, skin of leg, somite, stromal cell of endometrium, tail of embryo, ventricular zone
Gene ontology · 18
SF3B3 → catalytic step 2 spliceosome, mRNA processing, mRNA splicing, via spliceosome, negative regulation of protein catabolic process, nucleic acid binding, nucleolus, nucleoplasm, nucleus, protein binding, protein-containing complex assembly, protein-containing complex binding, RNA binding, RNA splicing, RNA splicing, via transesterification reactions, small nuclear ribonucleoprotein complex, spliceosomal complex, U12-type spliceosomal complex, U2-type precatalytic spliceosome
related to Interactions · 4
SF3B3 → SF3B1, SPT3, TAF9, Transcription
Band · 2
SF3B3 → 16q22.1, 8 E1|8 57.73 cM
Chr. · 2
SF3B3 → Chromosome 16 (human), Chromosome 8 (mouse)
End · 2
SF3B3 → 111,573,419 bp, 70,577,670 bp
Aliases · 1
SF3B3 → SF3B3, RSE1, SAP130, SF3b130, STAF130, splicing factor 3b subunit 3
BioGPS · 1
SF3B3 → More reference expression data
Databases · 1
SF3B3 → NCBI: entry; OMA: entry

Important terminology Word statistics

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Important terminology

splicing factor 3b complex gene bp chr subunit human band protein chromosome 16 component transcription location 3a u2 snrnp may

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
SF3B3AliasesSF3B3, RSE1, SAP130, SF3b130, STAF130, splicing factor 3b subunit 31.00infobox
SF3B3Band16q22.11.00infobox
SF3B3Band8 E1|8 57.73 cM1.00infobox
SF3B3Bgeeventricular zone1.00infobox
SF3B3Bgeeganglionic eminence1.00infobox
SF3B3Bgeestromal cell of endometrium1.00infobox
SF3B3Bgeeleft ovary1.00infobox
SF3B3Bgeeright ovary1.00infobox
SF3B3Bgeeectocervix1.00infobox
SF3B3Bgeeskin of leg1.00infobox
SF3B3Bgeeskin of abdomen1.00infobox
SF3B3Bgeecanal of the cervix1.00infobox
SF3B3Bgeebody of uterus1.00infobox
SF3B3Bgeemaxillary prominence1.00infobox
SF3B3Bgeemandibular prominence1.00infobox
SF3B3Bgeesomite1.00infobox
SF3B3Bgeeepiblast1.00infobox
SF3B3Bgeeprimitive streak1.00infobox
SF3B3Bgeeendocardial cushion1.00infobox
SF3B3Bgeetail of embryo1.00infobox
SF3B3Bgeehuman fetus1.00infobox
SF3B3Bgeedermis1.00infobox
SF3B3BioGPSMore reference expression data1.00infobox
SF3B3Chr.Chromosome 16 (human)1.00infobox
SF3B3Chr.Chromosome 8 (mouse)1.00infobox
SF3B3DatabasesNCBI: entry; OMA: entry1.00infobox
SF3B3End70,577,670 bp1.00infobox
SF3B3End111,573,419 bp1.00infobox
SF3B3EnsemblENSG000001890911.00infobox
SF3B3Entrez234501.00infobox

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