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SATB2

Special AT-rich sequence-binding protein 2 (SATB2) also known as DNA-binding protein SATB2 is a protein that in humans is encoded by the SATB2 gene. SATB2 is a DNA-binding protein that specifically binds nuclear matrix attachment regions and is involved in transcriptional regulation and chromatin remodeling. SATB2 shows a restricted mode of expression…

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Aliases
SATB2, GLSS, SATB homeobox 2
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1WI3, 1WIZ, 2CSF
Band
2q33.1 · 1|1 C1.3
Bgee
periodontal fiber · mucosa of sigmoid colon · tibia · rectum · mucosa of ileum
BioGPS
n/a
Chr.
Chromosome 2 (human) · Chromosome 1 (mouse)

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Map overview Semantic statistics

SATB2

Nodes23
Edges22
Triples107
Avg. degree1.91
Density0.086957
Components1

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SATB2

Top relations

Gene ontology · 31
SATB2 → cartilage development, cellular response to organic substance, chromatin binding, chromatin organization, chromatin remodeling, commitment of neuronal cell to specific neuron type in forebrain, DNA binding, DNA-binding transcription activator activity, RNA polymerase II-specific, DNA-binding transcription factor activity, RNA polymerase II-specific, embryonic pattern specification, embryonic skeletal system morphogenesis, histone deacetylase complex, multicellular organism development, negative regulation of transcription by RNA polymerase II, neuron migration, nuclear matrix, nucleoplasm, nucleus, osteoblast development, positive regulation of transcription by RNA polymerase II
Bgee · 20
SATB2 → barrel cortex, body of femur, Brodmann area 46, Dermatocranium, facial skeleton, left colon, mandible, maxilla, membranous bone, middle temporal gyrus, molar, mucosa of ileum, mucosa of sigmoid colon, mucosa of transverse colon, periodontal fiber, postcentral gyrus, rectum, rib, superior frontal gyrus, tibia
RNA expression pattern · 20
SATB2 → barrel cortex, body of femur, Brodmann area 46, Dermatocranium, facial skeleton, left colon, mandible, maxilla, membranous bone, middle temporal gyrus, molar, mucosa of ileum, mucosa of sigmoid colon, mucosa of transverse colon, periodontal fiber, postcentral gyrus, rectum, rib, superior frontal gyrus, tibia
related to Structure · 6
SATB2 → A590T, CUT, I481V, I730T, The, There
Band · 2
SATB2 → 1|1 C1.3, 2q33.1
Chr. · 2
SATB2 → Chromosome 1 (mouse), Chromosome 2 (human)
End · 2
SATB2 → 199,471,266 bp, 57,017,809 bp
is a · 2
SATB2 → DNA-binding protein that specifically binds nuclear matrix attachment regions and is involved in transcriptional regulation and chromatin remodeling, protein that in humans is encoded by the SATB2 gene
related to External links · 2
SATB2 → Registry, UCSC Genome Browser
Aliases · 1
SATB2 → SATB2, GLSS, SATB homeobox 2

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Important terminology

protein human gene bp chr band chromosome mouse location dna-binding expressed oral cleft expression also nuclei specific development ucsc nuclear

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
SATB2AliasesSATB2, GLSS, SATB homeobox 21.00infobox
SATB2Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1WI3, 1WIZ, 2CSF1.00infobox
SATB2Band2q33.11.00infobox
SATB2Band1|1 C1.31.00infobox
SATB2Bgeeperiodontal fiber1.00infobox
SATB2Bgeemucosa of sigmoid colon1.00infobox
SATB2Bgeetibia1.00infobox
SATB2Bgeerectum1.00infobox
SATB2Bgeemucosa of ileum1.00infobox
SATB2Bgeemucosa of transverse colon1.00infobox
SATB2Bgeemiddle temporal gyrus1.00infobox
SATB2BgeeBrodmann area 461.00infobox
SATB2Bgeesuperior frontal gyrus1.00infobox
SATB2Bgeepostcentral gyrus1.00infobox
SATB2Bgeefacial skeleton1.00infobox
SATB2BgeeDermatocranium1.00infobox
SATB2Bgeemembranous bone1.00infobox
SATB2Bgeemandible1.00infobox
SATB2Bgeemaxilla1.00infobox
SATB2Bgeerib1.00infobox
SATB2Bgeebody of femur1.00infobox
SATB2Bgeebarrel cortex1.00infobox
SATB2Bgeeleft colon1.00infobox
SATB2Bgeemolar1.00infobox
SATB2BioGPSn/a1.00infobox
SATB2Chr.Chromosome 2 (human)1.00infobox
SATB2Chr.Chromosome 1 (mouse)1.00infobox
SATB2DatabasesNCBI: entry; OMA: entry1.00infobox
SATB2End199,471,266 bp1.00infobox
SATB2End57,017,809 bp1.00infobox

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