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ProtCID

The Protein Common Interface Database (ProtCID) is a database of similar protein-protein interfaces in crystal structures of homologous proteins.

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Authors
Qifang Xu, Roland Dunbrack
Description
Similar interactions of homologous proteins in multiple crystal forms
Laboratory
Institute for Cancer Research
Primary citation
Xu & Dunbrack (2011)
Release date
2010
Research center
Fox Chase Cancer Center

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Overview

Advanced semantic analysis

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Map overview Semantic statistics

ProtCID

Nodes8
Edges7
Triples11
Avg. degree1.75
Density0.25
Components1

How this topic connects Entity context

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ProtCID

Top relations

related to External links · 4
ProtCID → Assemblies, Interfaces, PISA, Surfaces
Authors · 1
ProtCID → Qifang Xu, Roland Dunbrack
Description · 1
ProtCID → Similar interactions of homologous proteins in multiple crystal forms
Laboratory · 1
ProtCID → Institute for Cancer Research
Primary citation · 1
ProtCID → Xu & Dunbrack (2011)
Release date · 1
ProtCID → 2010
Research center · 1
ProtCID → Fox Chase Cancer Center
Website · 1
ProtCID → http://dunbrack2.fccc.edu/protcid

Important terminology Word statistics

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Important terminology

interfaces protein crystal proteins common interface pdb forms interactions contain entries also homologous homodimeric pfam different chain sequence pkinase cyclin

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
ProtCIDAuthorsQifang Xu, Roland Dunbrack1.00infobox
ProtCIDDescriptionSimilar interactions of homologous proteins in multiple crystal forms1.00infobox
ProtCIDLaboratoryInstitute for Cancer Research1.00infobox
ProtCIDPrimary citationXu & Dunbrack (2011)1.00infobox
ProtCIDRelease date20101.00infobox
ProtCIDResearch centerFox Chase Cancer Center1.00infobox
ProtCIDWebsitehttp://dunbrack2.fccc.edu/protcid1.00infobox
ProtCIDrelated to External linksInterfaces0.60section
ProtCIDrelated to External linksSurfaces0.60section
ProtCIDrelated to External linksAssemblies0.60section
ProtCIDrelated to External linksPISA0.60section

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    Min side: 3
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