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PDZ and LIM domain protein 5 is a protein that in humans is encoded by the PDLIM5 gene.
The analysis highlights Interactions and Overview as prominent areas in the source structure around PDLIM5.
Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.
Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.
High-confidence facts extracted from structured source data. Use them as anchors for further research.
A focused starting point derived from the topic graph, ranked independently of the source article order.
Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.
Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.
The extracted context around PDLIM5 shows recurring relationship patterns in the source. For example, PDLIM5 → actin binding, actin cytoskeleton, actin cytoskeleton organization, actinin binding, cadherin binding involved in cell-cell adhesion, cell growth involved in cardiac muscle cell development, cell junction, cell-cell adhesion, cytoplasm, cytosol, development of the heart, filamentous actin, membrane, metal ion binding, muscle alpha-actinin binding, muscle structure development, neuron projection, plasma membrane, postsynaptic density, postsynaptic membrane Another extracted example is PDLIM5 → atrioventricular valve, body of tongue, Epithelium of choroid plexus, gastrocnemius muscle, glutes, interventricular septum, medial head of gastrocnemius muscle, muscle of thigh, myocardium of ventricle, quadriceps femoris muscle, right ventricle, Skeletal muscle tissue of biceps brachii, Skeletal muscle tissue of rectus abdominis, soleus muscle, sternocleidomastoid muscle, thoracic diaphragm, tibialis anterior muscle, triceps brachii muscle, vastus lateralis muscle. Use these groups to spot repeated connection types before inspecting the individual relationships.
Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.
lim gene bp protein chr domain human band chromosome encoded proteins pdz involved location domains n-terminus interactions mouse cytoskeleton organization
TTTA extracted 90 structured relationships around PDLIM5. Examples in this analysis include PDLIM5 → Aliases → PDLIM5, ENH, ENH1, LIM, L9, PDZ and LIM domain 5 and PDLIM5 → Available structures → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2UZC, 2DAR. The table shows each extracted connection, where it came from and its confidence.
| Subject | Predicate | Object | Confidence | Src |
|---|---|---|---|---|
| PDLIM5 | Aliases | PDLIM5, ENH, ENH1, LIM, L9, PDZ and LIM domain 5 | 1.00 | infobox |
| PDLIM5 | Available structures | Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2UZC, 2DAR | 1.00 | infobox |
| PDLIM5 | Band | 4q22.3 | 1.00 | infobox |
| PDLIM5 | Band | 3|3 H1 | 1.00 | infobox |
| PDLIM5 | Bgee | Skeletal muscle tissue of biceps brachii | 1.00 | infobox |
| PDLIM5 | Bgee | Skeletal muscle tissue of rectus abdominis | 1.00 | infobox |
| PDLIM5 | Bgee | right ventricle | 1.00 | infobox |
| PDLIM5 | Bgee | triceps brachii muscle | 1.00 | infobox |
| PDLIM5 | Bgee | glutes | 1.00 | infobox |
| PDLIM5 | Bgee | thoracic diaphragm | 1.00 | infobox |
| PDLIM5 | Bgee | Epithelium of choroid plexus | 1.00 | infobox |
| PDLIM5 | Bgee | muscle of thigh | 1.00 | infobox |
| PDLIM5 | Bgee | gastrocnemius muscle | 1.00 | infobox |
| PDLIM5 | Bgee | body of tongue | 1.00 | infobox |
| PDLIM5 | Bgee | soleus muscle | 1.00 | infobox |
| PDLIM5 | Bgee | myocardium of ventricle | 1.00 | infobox |
| PDLIM5 | Bgee | atrioventricular valve | 1.00 | infobox |
| PDLIM5 | Bgee | quadriceps femoris muscle | 1.00 | infobox |
| PDLIM5 | Bgee | vastus lateralis muscle | 1.00 | infobox |
| PDLIM5 | Bgee | interventricular septum | 1.00 | infobox |
| PDLIM5 | Bgee | sternocleidomastoid muscle | 1.00 | infobox |
| PDLIM5 | Bgee | tibialis anterior muscle | 1.00 | infobox |
| PDLIM5 | Bgee | medial head of gastrocnemius muscle | 1.00 | infobox |
| PDLIM5 | BioGPS | More reference expression data | 1.00 | infobox |
| PDLIM5 | Chr. | Chromosome 4 (human) | 1.00 | infobox |
| PDLIM5 | Chr. | Chromosome 3 (mouse) | 1.00 | infobox |
| PDLIM5 | Databases | NCBI: entry; OMA: entry | 1.00 | infobox |
| PDLIM5 | End | 94,668,227 bp | 1.00 | infobox |
| PDLIM5 | End | 142,101,457 bp | 1.00 | infobox |
| PDLIM5 | Ensembl | ENSG00000163110 | 1.00 | infobox |
The concept neighborhoods around PDLIM5 bring nearby vocabulary together. In this analysis, examples include Search, Gene and Location. Use the clusters to find adjacent concepts and terminology that may deserve separate research.
For PDLIM5, one of the stronger structural bridges in this analysis connects PDLIM5 with Overview. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.
TTTA analyzes the structure around PDLIM5 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Interactions & Overview, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.
Source: Wikipedia — PDLIM5 · EN edition · Analysis: TopicsToTalkAbout