OPN5

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OPN5 topic overview

The analysis highlights Species distribution, Phylogeny and Function as prominent areas in the source structure around OPN5.

Related topics: 46
Source areas: 5
Connected nodes: 51
Extracted relationships: 56
Concept neighborhoods: 17
Bridge connections: 51

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Species distribution · 27 topics

Phylogeny · 8 topics

Overview · 7 topics

Function · 3 topics

Photochemistry · 1 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases: OPN5, GPR136, GRP136, PGR12, TMEM13, opsin 5
Band: 6p12.3 · 17|17 B3
Bgee: testicle · left testis · right testis · gonad · skin of thigh
BioGPS: n/a
Chr.: Chromosome 6 (human) · Chromosome 17 (mouse)
Databases: NCBI: entry; OMA: entry

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Protein
Gene
Opsin
G protein-coupled receptors G protein-coupled receptor
Photoreceptor protein
Ultraviolet (UV) light Ultraviolet
G protein

Function

Photochemistry

11-cis-retinal

Species distribution

Phylogeny

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How OPN5 connects Entity context

The extracted context around OPN5 shows recurring relationship patterns in the source. For example, OPN5 → 11-cis retinal binding, cellular response to light stimulus, detection of visible light, G protein-coupled photoreceptor activity, G protein-coupled receptor activity, G protein-coupled receptor signaling pathway, integral component of membrane, integral component of plasma membrane, membrane, photoreceptor activity, photoreceptor outer segment, phototransduction, response to stimulus, signal transducer activity, signal transduction, visual perception Another extracted example is OPN5 → apex of heart, Brodmann area 9, gonad, left testis, left ventricle, lower lobe of lung, prefrontal cortex, right testis, skin of thigh, testicle. Use these groups to spot repeated connection types before inspecting the individual relationships.

Top relations

Gene ontology · 16

OPN5 → 11-cis retinal binding, cellular response to light stimulus, detection of visible light, G protein-coupled photoreceptor activity, G protein-coupled receptor activity, G protein-coupled receptor signaling pathway, integral component of membrane, integral component of plasma membrane, membrane, photoreceptor activity, photoreceptor outer segment, phototransduction, response to stimulus, signal transducer activity, signal transduction, visual perception

Bgee · 10

OPN5 → apex of heart, Brodmann area 9, gonad, left testis, left ventricle, lower lobe of lung, prefrontal cortex, right testis, skin of thigh, testicle

RNA expression pattern · 10

OPN5 → apex of heart, Brodmann area 9, gonad, left testis, left ventricle, lower lobe of lung, prefrontal cortex, right testis, skin of thigh, testicle

Band · 2

OPN5 → 17|17 B3, 6p12.3

Chr. · 2

OPN5 → Chromosome 17 (mouse), Chromosome 6 (human)

End · 2

OPN5 → 42,922,286 bp, 47,832,780 bp

Aliases · 1

OPN5 → OPN5, GPR136, GRP136, PGR12, TMEM13, opsin 5

BioGPS · 1

OPN5 → n/a

Databases · 1

OPN5 → NCBI: entry; OMA: entry

Ensembl · 1

OPN5 → ENSG00000124818

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

human protein opsins gene neuropsin bp mouse chr band protein-coupled light neuropsins also chromosome sequences pie known receptors opsin nm

OPN5 relationships Subject–Predicate–Object triples

TTTA extracted 56 structured relationships around OPN5. Examples in this analysis include OPN5 → Aliases → OPN5, GPR136, GRP136, PGR12, TMEM13, opsin 5 and OPN5 → Band → 6p12.3. The table shows each extracted connection, where it came from and its confidence.

Subject	Predicate	Object	Confidence	Src
OPN5	Aliases	OPN5, GPR136, GRP136, PGR12, TMEM13, opsin 5	1.00	infobox
OPN5	Band	6p12.3	1.00	infobox
OPN5	Band	17\|17 B3	1.00	infobox
OPN5	Bgee	testicle	1.00	infobox
OPN5	Bgee	left testis	1.00	infobox
OPN5	Bgee	right testis	1.00	infobox
OPN5	Bgee	gonad	1.00	infobox
OPN5	Bgee	skin of thigh	1.00	infobox
OPN5	Bgee	left ventricle	1.00	infobox
OPN5	Bgee	lower lobe of lung	1.00	infobox
OPN5	Bgee	Brodmann area 9	1.00	infobox
OPN5	Bgee	prefrontal cortex	1.00	infobox
OPN5	Bgee	apex of heart	1.00	infobox
OPN5	BioGPS	n/a	1.00	infobox
OPN5	Chr.	Chromosome 6 (human)	1.00	infobox
OPN5	Chr.	Chromosome 17 (mouse)	1.00	infobox
OPN5	Databases	NCBI: entry; OMA: entry	1.00	infobox
OPN5	End	47,832,780 bp	1.00	infobox
OPN5	End	42,922,286 bp	1.00	infobox
OPN5	Ensembl	ENSG00000124818	1.00	infobox
OPN5	Entrez	221391	1.00	infobox
OPN5	External IDs	OMIM: 609042; MGI: 2662912; GeneCards: OPN5	1.00	infobox
OPN5	Gene location (Human)	Gene location (Human)Chr.Chromosome 6 (human)Band6p12.3Start47,781,982 bpEnd47,832,780 bp	1.00	infobox
OPN5	Gene location (Mouse)	Gene location (Mouse)Chr.Chromosome 17 (mouse)Band17\|17 B3Start42,867,674 bpEnd42,922,286 bp	1.00	infobox
OPN5	Gene ontology	11-cis retinal binding	1.00	infobox
OPN5	Gene ontology	G protein-coupled receptor activity	1.00	infobox
OPN5	Gene ontology	photoreceptor activity	1.00	infobox
OPN5	Gene ontology	signal transducer activity	1.00	infobox
OPN5	Gene ontology	G protein-coupled photoreceptor activity	1.00	infobox
OPN5	Gene ontology	integral component of membrane	1.00	infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around OPN5 bring nearby vocabulary together. In this analysis, examples include Gene, Expression and Function. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

OPN5
- Gene
- Expression
- Function
- Mrna
- Location
- Receptor
- Species
- Human
- Chromosome
- Bp
- Chr
- Mouse
opn5
- Gene
- Expression
- Function
- Mrna
- Location
- Receptor
- Species
- Human
- Chromosome
- Bp
- Chr
- Mouse
gene
- Opn5
- Location
- Chromosome
- Human
- Bp
- Chr
- Mouse
- Expression
- Function
- Mrna
- Receptor
- Species
ultraviolet (uv) light
- Photoreceptor
- Dark
- Nm
- Protein
- Expression
- Function
- Mrna
- Pathway
- Clade
- Craniates
- Location
- Orthologs
human
- Mouse
- Chromosome
- Bp
- Chr
- Location
- Band
- Opn5
- Expression
- Function
- Mrna
- Orthologs
- Species
species distribution
- Function
- Location
- Chromosome
- Opn5
- Bp
- Chr
- Gene
- Expression
- Human
- Mrna
- Pathway
- Photoreceptor
g protein-coupled receptors
- Receptors
- Contains
- Opsins
- Expression
- Function
- Mrna
- Pathway
- Photoreceptor
- Clade
- Location
- Orthologs
- Receptor
photoreceptor protein
- Receptor
- Light
- Pathway
- Photoreceptor
- Protein
- Expression
- Function
- Mrna
- Location
- Orthologs
- Species
- Band

Connections between topic areas Semantic bridges

For OPN5, one of the stronger structural bridges in this analysis connects OPN5 with Species distribution. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3

OPN5 — Species distribution · splits 24 ⟂ 28

OPN5 — Phylogeny · splits 43 ⟂ 9

OPN5 — Overview · splits 44 ⟂ 8

OPN5 — Function · splits 48 ⟂ 4

Map overview Semantic statistics

OPN5

Nodes52

Edges51

Triples56

Avg. degree1.96

Density0.038462

Components1

Source & methodology

TTTA analyzes the structure around OPN5 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Species distribution, Phylogeny & Function, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — OPN5 · EN edition · Analysis: TopicsToTalkAbout